| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0404 |
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| Symbol | gltD |
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| ID | 5206465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 495647 |
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| End bp | 497065 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640598618 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001279309 |
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| Protein GI | 148652216 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0157845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTA TTAATAACAA TTTTCAGTTT TTGGACGTGC CCCGTCGTGA GCCTGAGAAA
AAAGACATCG TCACCCGCTC TACCGAATTT GTGGAGATTT ATAGTCCCTT TGAGGCGACT
GAGGCGGCGC AGCAAGCCCA CCGCTGCTTA GAGTGCGGTA ACCCTTATTG TGAGTGGAAG
TGTCCGGTAC ATAACTACAT TCCTAACTGG TTAAAGCTTG CCACTGAAGG TCAGATTTTC
CAAGCGGCTG AGCTTTGTCA CCGCACCAAC ACTTTACCTG AAGTGTGTGG CCGTGTGTGC
CCCCAAGATA GATTATGTGA AGGCGCTTGT ACTTTAAATG ATGGCTTTGG CGCTGTGACC
ATTGGTAATG TCGAAAAATA CATCAACGAT ACGGCCTTCG CCCTAGGTTG GCGCCCAGAT
ATGAGTGATG TGCAGTGGAC GGATAAAAAG GTGGCCATTA TTGGTGCCGG TCCTGCTGGT
CTAGGCTGTG CCGATATTTT GGTGCGCGCG GGTGTGAAGC CTGTTGTGTT TGATAAACGC
CCTGAAATTG GCGGTTTATT AACCTTTGGT ATTCCTGAAT TTAAGATGGA AAAACAGGTG
ATGCGCAATC GCCGCACAGT ATTTGAAGGC ATGGGTATTG AGTTTCGCTT AAATACCGAA
ATTGGTACAG ATGTGACCAT TGATGAGCTG TTACAAGACT ACGATGCCGT GTTCATGGGC
ATGGGCACGT ATACTTATAT GCGAGGCGGT TATCCAGGCG AAGAGCTATT TGGGGTGTAT
GATGCCCTAG ATTACTTAAT TGCCAACGTC AATCGCTGCA ATGAGTGGGA ACAAGATCCA
AGCCAGTACA TCAACCTAAA AGACAAAAAG GTTGTGGTGT TAGGCGGCGG TGATACCGCC
ATGGATTGTA ACCGTACTGC CATCCGTCAA GGTGCTGAGC GTGTGGTTTG TGCCTATCGC
CGAGATGAAG CCAACATGCC AGGCTCGCTA CGTGAAGTAA AAAATGCCAA AGAAGAGGGG
GTTGAGTTTT TATTTAACCG TCAGCCGACT CAGATTGTGG GGCTAAATGG TCAAGTGACC
GGTGTGAAAG TAGTGACCAC TCAGCTGGGC AAACCAGATA ACCGAGGTCG TCAGCGTCCT
GAGCCCATTC CCAATTCAGA AGAGATTATT GAATGTGATG CGGTTATTAT GGCGTTTGGC
TTCCGCCCAA GTCCTGCTGA CTGGTTTGAG CAAAGCGCAG TTAAGATTGA TAACTCAGGG
CGCGTTTTGG CGCCTGAAGA GCAAGCCTTT AAGTTTCAGA CCAGCAACCC TAAGATTTTT
GCTGGCGGTG ATATGGTGCG AGGCTCGGAC CTAGTGGTCA CTGCCATTTG GGAAGGTCGT
GAAGCGGCCA AAGGCATCTT GGATTATCTA GAAGTGTAA
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| Protein sequence | MKRINNNFQF LDVPRREPEK KDIVTRSTEF VEIYSPFEAT EAAQQAHRCL ECGNPYCEWK
CPVHNYIPNW LKLATEGQIF QAAELCHRTN TLPEVCGRVC PQDRLCEGAC TLNDGFGAVT
IGNVEKYIND TAFALGWRPD MSDVQWTDKK VAIIGAGPAG LGCADILVRA GVKPVVFDKR
PEIGGLLTFG IPEFKMEKQV MRNRRTVFEG MGIEFRLNTE IGTDVTIDEL LQDYDAVFMG
MGTYTYMRGG YPGEELFGVY DALDYLIANV NRCNEWEQDP SQYINLKDKK VVVLGGGDTA
MDCNRTAIRQ GAERVVCAYR RDEANMPGSL REVKNAKEEG VEFLFNRQPT QIVGLNGQVT
GVKVVTTQLG KPDNRGRQRP EPIPNSEEII ECDAVIMAFG FRPSPADWFE QSAVKIDNSG
RVLAPEEQAF KFQTSNPKIF AGGDMVRGSD LVVTAIWEGR EAAKGILDYL EV
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