| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0401 |
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| Symbol | aroB |
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| ID | 5204767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 487825 |
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| End bp | 488925 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640598615 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001279306 |
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| Protein GI | 148652213 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00294823 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGTTG AGAGTCTTAT GAAAGCAAAT TTAGTCGTCC ACACCCAAAG CCATGATTAT
CCCATCATTA TCACCAGTCA GTGTGATATG GCCAAAGAAA TTGCGCCTTA TATCAAGGGC
AAACAAGTGA TGATAGTCAC CAACACCACA GTTGAAAAGC TGTATCTAGC AGACTTGGCT
GCGGGGCTAA AAGAGGACTT TGAGGTAATG AGTGTGGTGC TACCAGACGG TGAGCAATAC
AAGACTCAGC AGTATATTGA TACCATTTAT GACGCCTTGA TGGACAACCA CTGCAGCCGT
GACGTGACCT TGGTGGCCTT AGGCGGTGGG GTGATTGGCG ATATGACCGG CTTTGCTGCG
GCAAGCTTTA TGCGCGGGGT GAACTTTATC CAAATCCCAA CCACCTTATT GTCTCAAGTG
GATTCTAGTG TGGGCGGTAA AACAGGCATT AATCATCCAA AGGGTAAGAA CATGATTGGC
GCCTTTTGGC AGCCGCAAAT GGTGCTGGCT GATATGCACA CCTTGACCAC CTTGCCCCAG
CGTGAGTTGT CAGCGGGTAT GGCTGAGGTG ATCAAATATG CGCTGATTAT GGACGAGACG
TTTTTAGATT GGTTAGAGGA CAATATGGCC GCTTTAATGG GGCTTGATAA AGTGGTATTG
GCAGAAGCGG TGGCGCGCTG TTGTCAGTAC AAGGCCGATA TCGTGGCACA AGATGAGCGC
GAAGCGGGTA AGCGGGCACT GCTAAACTTT GGTCATACCT TCGGTCATGT GATTGAGACC
CATGAGGGCT ATGGTCAGTG GCTGCACGGC GAGGCAGTGG CTGCCGGAAT GGTGCAGGCC
GCTCAGCTGT CGCATAAGAT GGGCTGGATA AGTGAGGCGC AGCTGCAGCG TATCTGTGCG
GTGTTGATAT CGGCCAAGCT GCCCACACAG CCGCCTAGCA TAGATACCCA AATTGCCCTT
GACTTAATGC AACACGATAA AAAAGTTAAG TCAGGACAAG TTAGGCTGAT TTTGTTAAAA
TCAGTGGGTG ATGCCGTCGT TACTGCTGAC TTTGAGCCTA AGCTGCTTGA AGAGGTGCTT
GCAAGCTGCG TACCTAATTA A
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| Protein sequence | MDVESLMKAN LVVHTQSHDY PIIITSQCDM AKEIAPYIKG KQVMIVTNTT VEKLYLADLA
AGLKEDFEVM SVVLPDGEQY KTQQYIDTIY DALMDNHCSR DVTLVALGGG VIGDMTGFAA
ASFMRGVNFI QIPTTLLSQV DSSVGGKTGI NHPKGKNMIG AFWQPQMVLA DMHTLTTLPQ
RELSAGMAEV IKYALIMDET FLDWLEDNMA ALMGLDKVVL AEAVARCCQY KADIVAQDER
EAGKRALLNF GHTFGHVIET HEGYGQWLHG EAVAAGMVQA AQLSHKMGWI SEAQLQRICA
VLISAKLPTQ PPSIDTQIAL DLMQHDKKVK SGQVRLILLK SVGDAVVTAD FEPKLLEEVL
ASCVPN
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