| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0397 |
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| Symbol | |
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| ID | 5204582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 483001 |
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| End bp | 483513 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640598611 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001279302 |
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| Protein GI | 148652209 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00218419 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGGTCA TAAACATTTT AGCAGCGGTG GTCTGCTGTA TTTTGGTGTG GGGACATTTT
TATCAAGCAC ATGCCAAGCA GCAGCATCTT AATAGTCAAC TGGTGCTCAG CAATGCTCAG
TTAGAGGCGC AGATTACCAG CAGTGAGGTG TTACAGCAAC ACCAACACAC CATAAGCGCT
CAGATAGAGC TGCTCAATCA ACGACAAAGT CAGCGCTTGG CATTATCTGC GCTCTGGCGT
GACATAGCAA AAGCAGTACC TGAAGGCTTA TATCTGACTG GTATCAAAAG ACAAGGCAAT
TTATTGAGCG TTACTGGAAA AGCCAGCACA GCCCAGCAAG TTACTGATCT GATGGCGGCT
TTAGAGCGCA GCACTTGGCT GCATCAGGTA CAAGTGCAGC ATATTCAGGT AGCCGGCGCG
GATGCCATTA AAGAAGATGA GACCATCAAG ATATTGCCCG CTGCGAACAT GGATTTTGTG
ATTAGCAGCC AGCACCGTCC GTCTACTAAG TAA
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| Protein sequence | MVVINILAAV VCCILVWGHF YQAHAKQQHL NSQLVLSNAQ LEAQITSSEV LQQHQHTISA
QIELLNQRQS QRLALSALWR DIAKAVPEGL YLTGIKRQGN LLSVTGKAST AQQVTDLMAA
LERSTWLHQV QVQHIQVAGA DAIKEDETIK ILPAANMDFV ISSQHRPSTK
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