| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0393 |
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| Symbol | |
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| ID | 5204578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 474310 |
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| End bp | 476964 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640598607 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001279298 |
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| Protein GI | 148652205 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000925228 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000013775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCTAAAA CCACAGCTAA AAAAACAACC TCGACCCCCG CGGCCAGTGC AAAAGGCAAA
TCACTGGTCA TTGTGGAGTC TCCTGCCAAA GCAAAAACCA TCAACAAATA TTTGGGTGAT
GACTTTATTG TACGCTCAAG TATTGGTCAT GTGCGTGACT TGCCCACCAG CAGTGGCGTT
AAGAAAAAAG CAACCAAGAC GGATGAAAAG CTAAGCAAAG AAGACAAAGC GCAGCAGGCT
TTGGTACGTA GAATGGGTAT TGACCCTGAG CACGGCTGGA AAGCTGTGTA TGAAGTGCTG
CCTAATAAAA CCAAAGTGAT TAAAGAGCTT AAAGCCTTGG CCAAAGATGC CGATAAGATT
TATCTGGCAA CGGATTTGGA TAGAGAAGGG GAAGCGATTG CTTGGCATTT GCGTGAGGTT
ATCGGCGGAG ATGACAGCAA GTATCAGCGT GTGGTGTTTA ACGAGATTAC CAAATCGGCC
ATTCAAAATG CATTTAAAGA GCCCGGTAAG CTTGATATTG ACCGGGTGAA TGCGCAGCAA
GCACGCCGCT TCTTAGACAG AGTGGTTGGG TTTATGGTCT CGCCGCTACT GTGGCAAAAA
ATTGCCCGTG GCTTATCGGC TGGGCGAGTA CAGTCAGTAG CCACTCGGCT TGTGGTCGAG
CGTGAACGTG AAATCCGTGC CTTTATTCCA GAAGAGTATT GGCAAATTCA CGCCGATACC
ACCATGAAAG GTAGCGAGAA TGCCAATGTG GCTGCAGATA CTCCCATTCG CTTAGAGGCC
GTCAAACAGG CAGGCAAAGT ACTCAAGCTT GGCAACAAAG CGCAGACTGA TGCCGTACTG
GCCGTATTAA AACCGGCCAC CTTCGTGGTC AAAGAGCGTG AAGAGAAGCC CACTCAATCT
AAGCCGAGTG CGCCTTTTAT TACCTCTACT TTACAGCAAG CGGCCAGCAC ACGTTTGGGC
TTTCCTGTCA AAAAGACCAT GATGCTAGCT CAGCGCTTGT ACGAAGCTGG TCACATTACT
TATATGCGTA CCGATTCAAC CTTCTTATCC AATGATGCCT TGGCCAGTGT GCGCGGCTTT
ATTGAAGAGA ATTACGGCTC TAAATACTTG CCAGAAAAGC CTAATTTTTA TGGCAGCAAA
CAAAACGCAC AAGAGGCTCA CGAAGCCATT CGTCCGACCA ATGCCAATTT AAAATCCACC
CAACTCAAAG GGGTGGATCG TGATGCGATT CGCTTATATG AGCTGATTTG GCGTCAGTTT
GTGGCCTGTC AGATGCTACC GGCAAAATAT AAGTCGGTTA ATCTATTGGT AGAGGCGGGC
GATGTTGAGC TAAAAGCCCG CGGTCGCACC ATGACCTTTG ACGGCTTTAC CAAGGTTATG
CCACCTGCCA AAACCGATGA CACCTTATTG CCTGATGTCA AACAAGGCGA TGAGCTTAAT
TTAATAAAAC TAGATCCCAG TCAGCACTTC ACTAAGCCGC CAGCGCGTTA TACGGAAGCA
AGCTTAGTTA AAGAGCTTGA GAAAAAAGGT ATCGGCCGTC CATCAACTTA TGCCTCTATC
ATCTCAACCA TTCAAGACAG AGGGTATGTT CGCTTAGAAA ACAAGCGTCT GTATGCTGAG
AAGATGGGTG ATATTGTCAC CGACCGTCTA ACCGAAAGCT TCCCTGAGCT GATGGATTAT
ACCTTTACTG CGGGGCTTGA AGATGAGCTT GATCATGTGG CACAAGGCGA TCAAGATTGG
AAAGCGGTGT TAGATGACTT TTATGGGGAC TTTAAGACTA AGCTTGAGCA TGCCAAAGAT
AAAGACGGTA TGCGCCCGAA TGACCCCACC GATGTACCCG ACGTGCATTG CGATTTATGT
GGCCGACCAA TGCAGCTGCG TAATGGCTCA ACCGGTGTAT TCTTAGGCTG TACTGGCTAC
AACTTGCCGC CCAAAGAGCG CTGTAAGGGC ACCAAAAACC TAATGCCGGT AGAAGCCTTT
GCCAACTTAG ATGACAGCGA AATCGATGAA AGTGCTGAAG TCAAAGAGTT GATGGAGAAA
AAACGTTGTC CTAAGTGTAG CACAGCGATG GATGGCTATA TTGTGGATGG TGGCCTCAAG
CTGCATATCT GTGGTAACAA CCCAGACTGT GATGGCTATT TATTAGAAGA AGGTATGTTC
GAGGTGCCAG GCTCTGATGC GCCGACCATT GACTGTAATA AATGTGATGG TCAGATGGAG
CTTAAGACCG GCCGCTTTGG TCCTTATTTT GCTTGTAATA AGTGTGATAA TACCCGCAAA
GTGCTCAAAA ATGGTGAGCC TGCACCGCCG CGCATGGATC CTATTGATAT GCCAGAGCTT
AAGTCGACCA AGCATGAGGA TCACTTTATC TTACGAGAGG GGGCTGCCGG TCTATTCTTA
GCGGCCTCTA AGTTCCCTAA AGTGCGCGAG ACGCGTCCCC CTAAGCTGTC TGAGCTACGC
ACCATTAAGG ACAAGATGGA TGATAAGTTC CAGTATTTGT TTGATGGTCC AGATCAAGAT
CCGGAGGGTA ACCCTACCAT TTTGCGCTGG TCACGTAAGC AAAAAGAGCA GTACATTGGC
TCTGAGAGCT TAAAAACAGG CAAGGCCACG CGTTGGGGCG TTTACTGGCG TAAAGGCGAG
TGGGTAGAGG AGTAG
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| Protein sequence | MAKTTAKKTT STPAASAKGK SLVIVESPAK AKTINKYLGD DFIVRSSIGH VRDLPTSSGV
KKKATKTDEK LSKEDKAQQA LVRRMGIDPE HGWKAVYEVL PNKTKVIKEL KALAKDADKI
YLATDLDREG EAIAWHLREV IGGDDSKYQR VVFNEITKSA IQNAFKEPGK LDIDRVNAQQ
ARRFLDRVVG FMVSPLLWQK IARGLSAGRV QSVATRLVVE REREIRAFIP EEYWQIHADT
TMKGSENANV AADTPIRLEA VKQAGKVLKL GNKAQTDAVL AVLKPATFVV KEREEKPTQS
KPSAPFITST LQQAASTRLG FPVKKTMMLA QRLYEAGHIT YMRTDSTFLS NDALASVRGF
IEENYGSKYL PEKPNFYGSK QNAQEAHEAI RPTNANLKST QLKGVDRDAI RLYELIWRQF
VACQMLPAKY KSVNLLVEAG DVELKARGRT MTFDGFTKVM PPAKTDDTLL PDVKQGDELN
LIKLDPSQHF TKPPARYTEA SLVKELEKKG IGRPSTYASI ISTIQDRGYV RLENKRLYAE
KMGDIVTDRL TESFPELMDY TFTAGLEDEL DHVAQGDQDW KAVLDDFYGD FKTKLEHAKD
KDGMRPNDPT DVPDVHCDLC GRPMQLRNGS TGVFLGCTGY NLPPKERCKG TKNLMPVEAF
ANLDDSEIDE SAEVKELMEK KRCPKCSTAM DGYIVDGGLK LHICGNNPDC DGYLLEEGMF
EVPGSDAPTI DCNKCDGQME LKTGRFGPYF ACNKCDNTRK VLKNGEPAPP RMDPIDMPEL
KSTKHEDHFI LREGAAGLFL AASKFPKVRE TRPPKLSELR TIKDKMDDKF QYLFDGPDQD
PEGNPTILRW SRKQKEQYIG SESLKTGKAT RWGVYWRKGE WVEE
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