| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0378 |
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| Symbol | |
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| ID | 5205076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 452719 |
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| End bp | 453372 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640598592 |
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| Product | hypothetical protein |
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| Protein accession | YP_001279283 |
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| Protein GI | 148652190 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000913387 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000267093 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACTTAA ATTATGATTG GCTCAAAACT CAATATATTA AAGGGCTAAG CCATATGAGC
CATCTTAAGA ATACTTCGAT AAATGGCTTT GATCATGTTA TAAAAACTTC AAATAATCTG
CCTATTTATC AATCCGGCTT CACGTTACTT GAGGCCATAA TTTCAGTGCT CATATTAGCC
ACTATCAGCT CAATAGCCCT ACCCCCCTTT GTTACCGCTC AGCAAAGATG GGAAGCACAT
AAGATACGAT CTGATATTAT CAATACTTTT CGTGTTGCTA AAGCTCACAG CTTCACCCAG
CGCACCAATA CAGTGATGTG TTTGGCCGAT ATTCATCAAG TATGTCACAA ACAAGCCGTT
CACTATTTAC TGGTCTTTAG CGACAGTGAT GACAATCATA AATTTGACTT ACAAGCAGAT
CAGCTGTTGT TAAAGCAAGC TTTGAATTTA AATTATGGGC GGGTGTATCT TAATGCAGGG
CGGCGTCACT ATATTAAGTT CTTTGGTGAT AGCGGATTAC CACGCGGACA TTTTGGTCAC
ATAAAGTACT GTCCTAATAA TGGTAATAAG CAAAACATGT ATCAGATATC AATAAACCAA
CAAGGCAACC ATCGATTCAA GCCTTATCGC TTTAAAAAGA CTGGCTGCCC ATAA
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| Protein sequence | MDLNYDWLKT QYIKGLSHMS HLKNTSINGF DHVIKTSNNL PIYQSGFTLL EAIISVLILA
TISSIALPPF VTAQQRWEAH KIRSDIINTF RVAKAHSFTQ RTNTVMCLAD IHQVCHKQAV
HYLLVFSDSD DNHKFDLQAD QLLLKQALNL NYGRVYLNAG RRHYIKFFGD SGLPRGHFGH
IKYCPNNGNK QNMYQISINQ QGNHRFKPYR FKKTGCP
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