Gene PsycPRwf_0375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0375 
Symbolera 
ID5205073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp449984 
End bp451003 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content45% 
IMG OID640598589 
ProductGTP-binding protein Era 
Protein accessionYP_001279280 
Protein GI148652187 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.426985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000823221 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAATG CACCACAAGA CAATCAAGAC ATCACTCCTG AAACAAATTT GGGGACAGAT 
AACTTACTAG ACAGCTTTTT TGGCGACGAC AATGCCCTGC CAGAAGATTA CCGCGCAGGC
TATGTGGCCA TCGTGGGCCG TCCAAACGTC GGCAAATCAA CGCTAATGAA CCACATGTTG
GGTCAAAAGC TATCTATTAC TTCGCGTAAG CCGCAAACAA CCCGTCATCG TATTCATGGC
ATCTTATCTC ATGAAGATAT GCAAGCGGTG TTTGTCGATA CCCCAGGTAT TCACAGCAAT
GAAGTTCGCT TGATTAATGA GCGTATGAAT AAAGCTGCTT TTTCTGCGTT GGTGGACGTT
GACTTAGTAT TGTTCGTGGT AGATGGCGAT CAGTGGCGTG AAGACGACTT ATTGACCTTA
GAGAAGATTG GTGAGACCGA TACGCCTGTG GTACTGGTGA TTAACAAGGC GGATACCATT
AAAGATAAAG GCTCAATTCT GCCACTTATT GAAACCTATC ATGAAAACTT TGATTTTGCA
GATATTGTTC CGGTTTCTGC CTTAAAGAAC CAAAACCTAG AGCGTTTGCA GCAAGTGATC
CGCTCACATC TGCCTCAAGG CGCACCCATT TATGACACTG AGCAAATCAC CGATCGCAGT
GAGCGCTTTT TGGCCAGCGA AATCATTCGT GAAAAAATCA TGCGTCAGTC AGGTGATGAA
GTACCTTATG ATTTAACGGT ACAAATTGAC GAGTTCAAAG ATGAGCCGGC GCACATTGAT
CCAAAAACTG GCCGTAAGCG CAAAGCGGTA ACCTTTATTG ATGCCACTAT TTTTGTTGAA
CGTAATGGCC AAAAAGCCAT TATCATTGGT GATAAAGGCA GCCGCATTAA ACAAGTAGGT
ACAGCCGCTC GTGAAGATAT GGAAGCTTTG TTTGAGCGCA AAATTATGCT TAACTTGTGG
GTAAAAGTGA AGCAAGGCTG GTCAGATGAT GCGCGTGCGC TCAGCAGCTT AGGGTACTAA
 
Protein sequence
MANAPQDNQD ITPETNLGTD NLLDSFFGDD NALPEDYRAG YVAIVGRPNV GKSTLMNHML 
GQKLSITSRK PQTTRHRIHG ILSHEDMQAV FVDTPGIHSN EVRLINERMN KAAFSALVDV
DLVLFVVDGD QWREDDLLTL EKIGETDTPV VLVINKADTI KDKGSILPLI ETYHENFDFA
DIVPVSALKN QNLERLQQVI RSHLPQGAPI YDTEQITDRS ERFLASEIIR EKIMRQSGDE
VPYDLTVQID EFKDEPAHID PKTGRKRKAV TFIDATIFVE RNGQKAIIIG DKGSRIKQVG
TAAREDMEAL FERKIMLNLW VKVKQGWSDD ARALSSLGY