| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0356 |
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| Symbol | |
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| ID | 5205262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 428621 |
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| End bp | 429739 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640598568 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001279261 |
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| Protein GI | 148652168 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR01636] phage transcriptional activator, RinA family
[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000321506 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000547654 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTACTC CAAAAAAAAC CAAAACAACT AAAAAAGAGA CGGCTAAAAG CAGCCCACCT
ACAGCGGTCA CCTCTGAATT AGATCCAATC GATTTAGATA TCGATGCGGA GTTAGATGAC
GATGATCTGG CTCTAGATTA TGACGAGCTT GATGATGGGA TAGACGATGA TCTGCTGACC
CCCGAGCTTG CCAAAGCCGA TGACTGGGTA AGCGACTATC CCAACACCAG CACGCGCGAC
TTAGTGCCTG CGATGCCGGT GAACCTATCA GCACCCGGTA TCAACTTGGG TGCTTATATG
AATTCTGTGC ATCAGATACC TATCTTGACC ACAGAGCAAG AGCAAGAATT GGCGCATCGT
TATTACGACG ATGGCGATGT GGAGGCAGCG CGTATCTTGG TTATGTCACA CTTACGCTTT
GTGATTCATA TTGCGCGCAG TTATTCAGGC TATGGCTTGC CGCAAGCAGA CTTAATCCAA
GAGGGCAATT TGGGCTTAAT GAAAGCAGTA AAACGCTTTG ACCCCAATAA AGGCGTGCGT
CTGGTGTCTT TTGCTGTGCA CTGGATTAAG GCTGAAATCC ATGAGTTTGT GATTCGTAAC
TGGCGCATTG TCAAAGTGGC CACCACCAAG GCACACCGTA AGCTGTTCTT TAACTTACGC
AGTCTAAAAA AGACCAACAA TCAGCTGACT TTAGAGGAGG CCGATGCCAT TGCCGCAGAC
TTAAACGTCA CCCGCAAGCA AGTGCTAGAG ATGGAGTCGC GTCTGACCTC TTATGATGCA
TCATTTGAAG CACAGTCCAC TGATGATGAA GACGGCCACT ATGCGCCGCA GCTTTTCTTG
GAAGATGGCG TTGATCCGGC AGAGATGGTG GAAGATGCTG ACTGGGAAGA GAACAACACC
AATGCCTTGA TGGATGCTAT GGATACTTTA GATGAGCGCT CTCGTGATAT CGTTGAACAG
CGCTGGTTGT CCGAACAAAA ATCCACCTTG CATGAGTTGG CAGCGGTGTA CAATATCTCA
GCTGAGCGCG TGCGCCAAAT CGAAAAAAAT GCCATGGATA AAATCCGTGA GGCCATGACC
ATCGACAGCG TCATTATGCC AAGCGATGAT GCTTATTAA
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| Protein sequence | MATPKKTKTT KKETAKSSPP TAVTSELDPI DLDIDAELDD DDLALDYDEL DDGIDDDLLT
PELAKADDWV SDYPNTSTRD LVPAMPVNLS APGINLGAYM NSVHQIPILT TEQEQELAHR
YYDDGDVEAA RILVMSHLRF VIHIARSYSG YGLPQADLIQ EGNLGLMKAV KRFDPNKGVR
LVSFAVHWIK AEIHEFVIRN WRIVKVATTK AHRKLFFNLR SLKKTNNQLT LEEADAIAAD
LNVTRKQVLE MESRLTSYDA SFEAQSTDDE DGHYAPQLFL EDGVDPAEMV EDADWEENNT
NALMDAMDTL DERSRDIVEQ RWLSEQKSTL HELAAVYNIS AERVRQIEKN AMDKIREAMT
IDSVIMPSDD AY
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