Gene PsycPRwf_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0351 
Symbol 
ID5205335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp423586 
End bp424470 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content52% 
IMG OID640598563 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001279256 
Protein GI148652163 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00140647 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000514115 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCCTA TCATTGGATG TGTGCAGCTG AGCAGTCAGT TTGATATCGA GACCAATTTA 
GCGAATATAC AACGTGCTGT AATCGCCGCT AAGCAGCAAG ATGTCCACCT ATTGGTGCTG
CCTGAGAATG CTTGCCGGAT GGGGGGACAG CAGCAGCTTG CCGAGCGCTT CGATGAGCTG
TCGCAGTGGT ATGCCACTTT GGCCTTCGAG CATCAGATGT TCATTGTCGC TGGCAGTTTA
CCTTGTGCGT ATCGTCCTGA TGGTACGCCA GTACCTGGTG AACGTTTGCG CCAAGTCAGT
CAATTATTCT CACCTGAGGG CAAGCGAGTG GCGCGTTATG ACAAGATTCA TTTATTTAAA
GCGCAAGTGG CCGATAACAC CGGAAGCTAT GATGAGGGCA GAACTTTTGA GCCTGGTGAT
ACCACGGTAG TCGCACAGTG CGATATGGCC AACCTGCTTG GCCAATCAGC TCAGACTCAG
CCCCTGTCTG TGGGGATGAT GGTGTGCTTT GATCTGCGCT TTCCCGCCTT AGCGCAAAAG
CTGCGGCAAT CAGGCGCCGA GATTCTAACC GCACCATCCG CCTTTACTTA TCAAACGGGT
AAGGCGCATT GGCAGTTGTT ATTACAAGCA CGTGCCTTGG ATGCTCAGTG CTTGGTGGTA
GGCTCAGCTC AAGGCGGCAC GCACGATATC CCCAGTGGGC AGCGGCAGAC TTGGGGGCAC
AGTAGCATTA TGAATGCTAA TGGTGAGCAG CTGGTCGGCA CCAATCAGAC CAAGCTTATG
CAGCCTGAGC AGGGATTTGA ATTAATTACT GCTCCCTTTG AGCGCACAAA GCAGCAAAAT
TGGCGCCAAA ACATGCCCAT CCATCACTGT CATCGCTTGG CATAA
 
Protein sequence
MDPIIGCVQL SSQFDIETNL ANIQRAVIAA KQQDVHLLVL PENACRMGGQ QQLAERFDEL 
SQWYATLAFE HQMFIVAGSL PCAYRPDGTP VPGERLRQVS QLFSPEGKRV ARYDKIHLFK
AQVADNTGSY DEGRTFEPGD TTVVAQCDMA NLLGQSAQTQ PLSVGMMVCF DLRFPALAQK
LRQSGAEILT APSAFTYQTG KAHWQLLLQA RALDAQCLVV GSAQGGTHDI PSGQRQTWGH
SSIMNANGEQ LVGTNQTKLM QPEQGFELIT APFERTKQQN WRQNMPIHHC HRLA