Gene PsycPRwf_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0349 
SymboldapF 
ID5205333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp421543 
End bp422424 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content50% 
IMG OID640598561 
Productdiaminopimelate epimerase 
Protein accessionYP_001279254 
Protein GI148652161 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000570655 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000127535 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTATAG AGTTTACAAA AATGCATGGG CTGGGCAATG ACTTTATGGT CATTGACTTG 
GTCACTCAGC GTTTGGAGCT GACACCAGAG CTGATTACAT TATTGGCTGA TCGTAACTTA
GGTATTGGCT TCGATCAGCT GTTGGTGGTT GAGCCACCCA TGCGTCCAGA TGTTGATTTT
CGCTACCGCA TCTTTAATTC AGATGGTAGT GAAGTGGAGC AATGTGGTAA TGGGGCACGC
TGTTTTGCCC GGTTTGTACA GGCGCGCAAA CTGTCATTCA AGCAGCGTAT TCGGGTTGAA
ACCAAGTCAG GTATTTTGAC GTTATCGACC GATAATTACG GCTGGGTAGA GGTGGATATG
GGCAAGCCGC GCTTTGAGCC GGCAGAGATC CCTTTTACGC CCAAAGCCAT TACTAAAATA
CAAAACGCTT ATCACCTAGA TGTCGAGGGG ACGCCGGTAC AATTGTATGT GGCCAATATG
GGCAACCCAC ATGCGGTTAT TAAGGTCGAT GATATCTTGA CGGCCGATGT TGAGAAGCTT
GGCAAAGCCA TTGAGTCGCA TCCGGCATTT CCTGAGCGGG TCAATGTTGG CTTTATGCAG
GTGATGAACC AGCGTCACAT TCGTCTGCGT GTCTATGAGC GCGGTGTGGG CGAGACCCAA
GCTTGTGGTA CAGGTGCTTG TGCGGCGGTC GCTACAGGCA TTCGCGAAGG CTGGCTGGAT
GAGGGCGAGG AGATTAGAGC GCAGCTTTAT GGCGGCAGTT TACTGATTCG CTGGTCACCT
GGCTATTCTG TGATGATGAC CGGCCCGACC GCTTTCGTCT ATGAAGGTGT GTTTAGTCCT
GATGGTATTA TGGCGCAGGC CGGTCTTAAG CCATTAAGCT AG
 
Protein sequence
MLIEFTKMHG LGNDFMVIDL VTQRLELTPE LITLLADRNL GIGFDQLLVV EPPMRPDVDF 
RYRIFNSDGS EVEQCGNGAR CFARFVQARK LSFKQRIRVE TKSGILTLST DNYGWVEVDM
GKPRFEPAEI PFTPKAITKI QNAYHLDVEG TPVQLYVANM GNPHAVIKVD DILTADVEKL
GKAIESHPAF PERVNVGFMQ VMNQRHIRLR VYERGVGETQ ACGTGACAAV ATGIREGWLD
EGEEIRAQLY GGSLLIRWSP GYSVMMTGPT AFVYEGVFSP DGIMAQAGLK PLS