| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0335 |
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| Symbol | |
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| ID | 5206020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 404540 |
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| End bp | 405679 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640598545 |
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| Product | formate dehydrogenase, subunit FdhD |
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| Protein accession | YP_001279240 |
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| Protein GI | 148652147 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.727751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000798764 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAATA CAGCAGCACA TTTTGACTCA CAGATAGGCG TGCCGGTGGA GTTACAACGC
CGGCTGACTC GAGAGCACAG TGCGCAAATG CACCGTTTTA CGCGCAGTGA TGAGGCGTCT
ATAGGTGGTG GCAGCTGTGT TAGCAGTCGT ACCCCCACTA AAGATGCTCA GCCATTACAG
ATTGAGACCC ATCTGGCTAC GTTAGCAGTA GAGGCGGCAG TGGCTTTGGT CATCAATGGC
ATTCATTATG CGGTGCTGAT GGCTAGCCCC GCTCAGCTTG AGCATCTGGC ACTGGGGTTT
TTGTACAGTG AAGGCTTGAT ACAGCACAGT GGTGAGCTGC TCGACTGGGA GATTACCGCC
ATTAATAGTG TTGAGGATTT ACAGGCTTTC GCACCCGCGA ATGAGTCACG TCTTATTGAG
TCACAAGCTG CAGTAAACTG GGCGCATCTG CTCAGTGATT ATGAAGCGTA CGTCGTCACC
TTAGTGCTCA ATCAGCGCTG CCATCAGCGT ATTTTAGCGC AGCGCCGGCA ACTGGCTGGG
CGTACAGGCT GCGGAATGTG CGGAATGACC GGATTGCAGC AGGCTTTGCC GGATCTAAGC
GCCTATAGTC GTTATGCTAC AAGCGATGAA GCATCAAGCT CCCCCAGCTA TCCAGTACAG
CCTGTCAGCG TAAAGCAAGC GGCGTATGGT CGTGGTGATA ACGCTATTAA TGGCCGTGCT
GATAATGGCT CGCCTAATAG CAGTGCCGAC AAGCAGACAC GTCCAAACCT AGAGCAGTTA
TTACAAATTA GAGCACTAAT TGAGTCGACC CAAGCCACGC ATCAGCTAAC GGGCGCAGTA
CATGCAGCAG CAACTTGGTA TCAAGGAGAG CTGTACGTGT TTGAAGATGT CGGTCGACAC
AATGCACTGG ATAAGCTTAT TGGGTGGCAG CTGCGCAATC AAGTGGCGTT AGAGTTTGTG
GTCATGACCT CAAGACTGTC TATTGAGCTG GTTCAAAAAG CAGTGCGTTG TCGTCTGCCT
TGGCTGGTTG GTATGTCAGC ACCAACCAGT ACTGCGGTAC GGGTGGCACA GCGTTATGGG
CTGGGCTTAG CCGGGTTTTT GCGAGATAAT AGAGTGACTT ATTATGGTGA TAATGTGTAG
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| Protein sequence | MDNTAAHFDS QIGVPVELQR RLTREHSAQM HRFTRSDEAS IGGGSCVSSR TPTKDAQPLQ
IETHLATLAV EAAVALVING IHYAVLMASP AQLEHLALGF LYSEGLIQHS GELLDWEITA
INSVEDLQAF APANESRLIE SQAAVNWAHL LSDYEAYVVT LVLNQRCHQR ILAQRRQLAG
RTGCGMCGMT GLQQALPDLS AYSRYATSDE ASSSPSYPVQ PVSVKQAAYG RGDNAINGRA
DNGSPNSSAD KQTRPNLEQL LQIRALIEST QATHQLTGAV HAAATWYQGE LYVFEDVGRH
NALDKLIGWQ LRNQVALEFV VMTSRLSIEL VQKAVRCRLP WLVGMSAPTS TAVRVAQRYG
LGLAGFLRDN RVTYYGDNV
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