Gene PsycPRwf_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0327 
Symbol 
ID5206819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp394133 
End bp395731 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content46% 
IMG OID640598537 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_001279232 
Protein GI148652139 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000196917 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTACTG AACATCTCGT TGATATATCC CGCTTGCAAT TTGCGGTAAC AGCGCTTTAC 
CACTTTTTAT TTGTTCCGTT AACCTTGGGT ATGGTTTGGA TTCTGGTGAT TATGGAGTCC
GTCTATGTCA CAACCGGTAA TCCAATCTGG AAGGACATGA CCAAATACTG GGGAAAGCTC
TTTGGTATTA ACTTCGCTTT AGGGGTGACC ACAGGGATTA CCATGGAGTT CCAGTTCGGG
ACCAACTGGG CCTATTATTC TCATTACGTT GGGGACATCT TCGGTGCGCC ACTGGCCATT
GAGGGTCTTA TGGCCTTCTT CTTAGAGTCT ACCATGGTGG GCCTATTCTT CTTCGGTTGG
GATAGACTCT CGCGCGCTCA GCATTTGATT GTCACTATGC TAATGGCGCT TGGTACCAAC
TTGTCTGCGC TGTGGATCTT GATTGCCAAC GGCTGGATGC AAAGCCCTGT AGGCGCATCA
TTTAGCTACG AAACCATGCG TATGGAGATG GACAGCTTCG CAACCATCTT ATTTAACCCT
GATGCCCAAA ACAAATTCGT ACATACGGTA TCAGCCGGTT ATGTCACCGC CTCTATGTTC
GTTTTATCCA TCTCAGCTTT ATACCTACTA CGCAAACGTG ACGTGCCTTT TGCCAAGCGT
AGCTTTCAGG TAGCCTCAGC CTTTGGTATG GCTTCAATCT TAAGTGTTAT CGTGTTGGGT
GATGAATCAG GCTACTCTAT TGGCGCCGCT CAGCAAACCA AGATGGCGAC GATTGAAGCC
ATGTGGCACA CCGAGCCTGC CCCTGCGTCC TTTAACCTGA TTGCAGGTAT TAATGAAAAA
GAGCAAAAAA ACGATTGGCA AATCCAAATT CCTTATGCCA TGGGTATTAT CGGTACGCGA
TCTTTAGATA AAGAAATCCC AGGTATTCAT GAGATTAAAG AGGTCAACCG AGGCCGCATT
ATGAATGGGA TGCAGGCAGT GGACTTACTT GAGCAGCTAC GTGAAAATCC ACAAGATGCC
GCCTTAAAGA CCCAGTTTGA AGCGGTAAAA GAAGACCTAG GCTTTGGCTT ATTGCTTAAA
AAATACACCG AAGATGTCAC TCAAGCTACC CCTGATATGA TCCAAAAAGC AGTGGATGAC
ACCATTCCAG CGGTGAAGCC TATGTTCTGG TCATTCCGTG GTATGGTGGG GCTAGGCTTC
TTGATGCTGG CGTTATTTGC AGTGAGCATG TGGCATACCA TTAAAGGCAA CTTTGCAGAA
AAAACTTGGC TATTAAAGTG GGCGGTAATT ATGTTGCCTG CACCTTGGAT TGCCATTGAG
CTTGGTTGGT TCGTAGCCGA GTATGGCCGT CAGCCTTGGA CTATTTATGG GGTACTTCCG
ACCTATTTAT CAGTAACTAA CTTCAGTGTG GCCAACGTTT ATGGCTCATT GGCAGGCTTT
GTCGGTTTTT ATACCATCTT GCTAATTATC GAAGTCTATC TGATGGTGAA GTATGTCAAG
CTAGGCCCAG CCAGTTTAGG CACCGGCCGT TATGATGGGG AAACCCCACG TAATGTGACC
CCAGTGCATA GCAATAAGGA GGTCAACGAT GTTATTTGA
 
Protein sequence
MITEHLVDIS RLQFAVTALY HFLFVPLTLG MVWILVIMES VYVTTGNPIW KDMTKYWGKL 
FGINFALGVT TGITMEFQFG TNWAYYSHYV GDIFGAPLAI EGLMAFFLES TMVGLFFFGW
DRLSRAQHLI VTMLMALGTN LSALWILIAN GWMQSPVGAS FSYETMRMEM DSFATILFNP
DAQNKFVHTV SAGYVTASMF VLSISALYLL RKRDVPFAKR SFQVASAFGM ASILSVIVLG
DESGYSIGAA QQTKMATIEA MWHTEPAPAS FNLIAGINEK EQKNDWQIQI PYAMGIIGTR
SLDKEIPGIH EIKEVNRGRI MNGMQAVDLL EQLRENPQDA ALKTQFEAVK EDLGFGLLLK
KYTEDVTQAT PDMIQKAVDD TIPAVKPMFW SFRGMVGLGF LMLALFAVSM WHTIKGNFAE
KTWLLKWAVI MLPAPWIAIE LGWFVAEYGR QPWTIYGVLP TYLSVTNFSV ANVYGSLAGF
VGFYTILLII EVYLMVKYVK LGPASLGTGR YDGETPRNVT PVHSNKEVND VI