| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0325 |
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| Symbol | |
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| ID | 5206817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 389854 |
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| End bp | 391644 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640598535 |
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| Product | ABC transporter related |
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| Protein accession | YP_001279230 |
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| Protein GI | 148652137 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000216816 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAAC ATCCGATGCG CTCACACAGC GAGCTTGATA GCGCAGCCCG CCACGCCCCT
GCTTTTCGTC TTCGAGATAT GTTCAAGCCC TCGTTTGACT TATGGCTCAT CTCTTGGGGC
TTAGGGCTGA TCACTGCATT ATCTATGATA GCGCTGCTGA TGATCTCTGG GTGGTTTATT
ACGGGTGCAG CGCTGGCCGG AATGATTGCA GTCGGCTCGC ACAGCTTTAA CTATATGCTG
CCGGCCGGTA TTATCCGGAT GCTGGCCATG GCACGTACCG CTGGGCGCTA TGGCGAGCTG
ATGGTGTCAC ACCATGCGGT GTTTGATTTA TTAAAAACGC TGCGCCTTCG CTTTTTTAAC
CGCTTAGCTG CACTACCGCT TACTCAGCAG CGCAGTGCCC TACAAGCCTC ACAATATATG
CACCGATTGG TCAGCGACAT CGATAAGTTG GACGAATTTA TCTTACGCGT TATCTCGCCT
TGGCTGATTG GCGGCTTAAG CGTATTGCTA TTGGGGGTTT TTATAGGCTG GGCACTTCCG
ATTGCGTCAA GCTTTAAGCT CATTATTTAT GTGCTCCTGG CTTTAAGCCT AGTGATTGCC
TTACTGGCCA GTTATAACGG CATCGCTCAG GCCAAGCAGT TATCTCAAGT CTCTGAAGCA
CGTCGCCAGC AGCTACTATC GCCGCTGGCC ATTATCACCC AGCTGCTACT TTGGCAGCAG
TGGCAGACGC AAACTCAAGG CTATGTGGCA CAAGACAATC AGCTTCAAAA ACTACAATGG
CAAGCCCAAA AGCGCCGCTC TGTTTATATG CTACTGATTC AGTGGCTGTT TTATTTGGCA
GTGCTGACCG TATTGTTCGC CATCTATAGC GTCACTCAAG GCGGCTCTGA GACAACCTTG
CTGCCTAAGC TGCAATCGGT GATTGAGGTG CCATTGGTAT TGGCAGTGAC CTTGGGGCTG
CTCGGTATTC AAGAGATTGT CGTGCCGCTG GGTCAGCATT ATTTGGCTTT AGGCAATAGT
ATCGCTGCCA AAGACCGGCT AAATGATTTG TTATCAAGCT CAAGGCCGAC CCCTACCCCC
AATCAAGCTA ACACTGACAC TGACACGGTT TCTACCTCTG CACCCAAGCC GCTGCACCGC
TTACCCCAAG CGCCGTTACA AGCTGAGCTG ATTTATGTCT CAGCAAAGAT TGAAGGGGCC
TTAGTCGGAG CAAAAGAGGT GAGTGTGACG GTCAACTCAG GTACGCCGTT GATTATCAAA
GGCCCTTCTG GCTGTGGTAA ATCGACCCTG CTGCAGGCCT TAGCTGGTGA GCTGCCGCTG
CAGTCAGGTG AGATTCAGTT AAATGGTAAA AACTGGTTTG AGTATGACTG GCAAGACCAA
CTAGGCTACT TAGGACAGCA GCTTGATATC TTTGATCAAA GCTTGGCGGC CAACCTGCGC
CTAGGCAAAC CTGAAGCCAG TGATGAAGAG CTAATCGCCG CCTTAGATAA GGTGGGGCTA
CTGGGCTGGC TACAAGCGCA GCCACAAGGG CTGGACACCG CTTTGGGCGA ATATGGTGCC
GCCATCTCAG GCGGGCAAGC ACGCCGCATT GCTTTAGCGC GTCTGCTGTT AAAGCCACGC
CGCGTGCTAT TATTAGATGA GCCTTTTGCA GGTCTTGATG CGCCTACCAG AGCACAGCTG
TGGCAAAACG TGCGTGAGCA TCAAAAGCAA AACCTACTTA TTGTGGTCAG CCATCATCAG
TGGGATATGG GGCTCTGTGA CAGCATCAGC CTACCTGAGA CCCAGCTTTA A
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| Protein sequence | MSKHPMRSHS ELDSAARHAP AFRLRDMFKP SFDLWLISWG LGLITALSMI ALLMISGWFI
TGAALAGMIA VGSHSFNYML PAGIIRMLAM ARTAGRYGEL MVSHHAVFDL LKTLRLRFFN
RLAALPLTQQ RSALQASQYM HRLVSDIDKL DEFILRVISP WLIGGLSVLL LGVFIGWALP
IASSFKLIIY VLLALSLVIA LLASYNGIAQ AKQLSQVSEA RRQQLLSPLA IITQLLLWQQ
WQTQTQGYVA QDNQLQKLQW QAQKRRSVYM LLIQWLFYLA VLTVLFAIYS VTQGGSETTL
LPKLQSVIEV PLVLAVTLGL LGIQEIVVPL GQHYLALGNS IAAKDRLNDL LSSSRPTPTP
NQANTDTDTV STSAPKPLHR LPQAPLQAEL IYVSAKIEGA LVGAKEVSVT VNSGTPLIIK
GPSGCGKSTL LQALAGELPL QSGEIQLNGK NWFEYDWQDQ LGYLGQQLDI FDQSLAANLR
LGKPEASDEE LIAALDKVGL LGWLQAQPQG LDTALGEYGA AISGGQARRI ALARLLLKPR
RVLLLDEPFA GLDAPTRAQL WQNVREHQKQ NLLIVVSHHQ WDMGLCDSIS LPETQL
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