Gene PsycPRwf_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0319 
Symbol 
ID5204646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp384181 
End bp384852 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID640598529 
Producttwo component transcriptional regulator 
Protein accessionYP_001279224 
Protein GI148652131 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000369721 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000968682 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACATA TTTTATTAGG CGATGACGAT AAAGAGCTGA CCGATTTGTT ACAGGAGTAC 
TTGACCAATC ACGGTATCCG CTGTGACTGC GCTTATGACG GGGAACAGGT GCTCAATAAG
ATAAAATCTC AGCCTTATGA TTTAATCGTG TTAGACATCA TGATGCCCAA GATTGATGGG
TTAAATGTGC TGCGTCAATT ACCGACCCTG ACCCAGACGC CCGTTATTAT GCTCACGGCT
AAAGGTGATG AAATTGACCG TATCATTGGC CTTGAGCTGG GTGCAGATGA TTATATTGCC
AAGCCTTGTA ATCCACGTGA GTTGTTGGCT CGCATCAATG CTGTTATCAA ACGCACCACT
ATGCAGCAAA GCGATATTGT ACCGCTGGAG CATGAGCGCC TGCAGTTGGA TCAAGTGCAC
CGTATCTGCA CGGTAGATGG CGAGACGCTG CAAGTAACCG GAACTGAGTT TGACCTGTTG
GTGGCCTTAT TACAGCAGCA AGGTAATGTG GCAAGCAAGG AGTGGCTGTC GCAAACTGTG
CTACAGCGCG AGCTACAGCC TTTAGATAGA AGTCTAGATG TGCATGTCTC ACGGCTCAGA
AAAAAACTAC AACCTTATCA TGAAGACCCA ATAAAAGCGG TGCGCGGTAA AGGCTACCAA
CTGGTTTTAT AA
 
Protein sequence
MTHILLGDDD KELTDLLQEY LTNHGIRCDC AYDGEQVLNK IKSQPYDLIV LDIMMPKIDG 
LNVLRQLPTL TQTPVIMLTA KGDEIDRIIG LELGADDYIA KPCNPRELLA RINAVIKRTT
MQQSDIVPLE HERLQLDQVH RICTVDGETL QVTGTEFDLL VALLQQQGNV ASKEWLSQTV
LQRELQPLDR SLDVHVSRLR KKLQPYHEDP IKAVRGKGYQ LVL