| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0315 |
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| Symbol | |
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| ID | 5204889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 376938 |
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| End bp | 379145 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598525 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001279220 |
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| Protein GI | 148652127 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000144056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000288236 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGATTTC AACCAACCCA GCTGGTGTTA AGTGCCGCCG CCATTGGTAT GGCCGGTGTG
GTGTTATCAC ACAGCTATAG CTCTGCTGTG GCTGCGGATA AAAGCGCCTT TGTTGCCACA
CCCGAGCAAA AGCTTACCAC ACGCCAAGTA GCCGCTTTAT TAGACAGAGC GCATTATTCC
AATAAGCGCT TTGATGAGGC GATGGGCCGT AAAGTGTTGG ATATGTATTT TGACCGTTTG
GACCCCAATC ATACTCTATT TTTGCAATCA GATATTAATG AATTAACCAC CAAATACGGT
GCAACTTTTG CCGATAGATT AAAGCAGGGC GATCTCAGCG CAGTACAGGC AATTTTTAAT
CGTTATACCC AGCGATCAAA TGAGTACTAT AACTTCGCCG ATAAGTTCTT AAGTAAGCCT
GTCAATCTTA ATCGCAATGA TTCTGTGGTG CTTGACCGTG AAAAAGAACC CCGCTTTAAG
AGTGCTTCAG AGCAACAAGG CTATTGGGGC CGTCAATTAA CTTTGCAGAT TATCAATCTA
ACTTTAGGTC AAGAAGAAGA CAAGGCTCGT GATGAGCTGT ATACCAAAAA CCCTGAGCTG
ACCAAAGGTA ACGACTTAAT CTTAGGAGAG GACAGAAGCC CGCAAGAGAT TTTGTTAAAT
CGTTTGCATC GTCAGCAAGA GCAGCTACAG CGCATTAAGA GCGATGAGAT CATGGAGTCG
GTGCTAAATA CAGCCACCTT AACTTATGAT CCGCACAGCA ACTATTATGC CCCTGTGCAA
TCGGTCGAGA TGCAAGTGCA GTCCAACTTG CAATTAGAAG GTATTGGCGT GTCTATTCGC
CCTTATCGTA AAAACCCAGA TTATACCCAG ATTGTGACCT TGGTTGATGG TGGACCCGCT
GCCAAATCAG GCAAAGTGCA GCCCAATGAT TTGATCATGG CTGTGGCCAA AGATGGCGAG
AATATGCAAG ATGTGGTGGG CTGGTCAACT CGTGAAGTGG TGGCCTTAAT CCGCGGCAAA
CGTGGCACAG ATGTGACCAT CAAAGTTAAG CAGCCCAATA GTCCTGATGC CTCAGCACGT
ACCATTGTCA TCACCCGTGA TGTGATTGAG CAAGAAGATG CGGGCGTGAC TCATCGGGTG
ATTACGGTAA AACCTGAAGG CAGCACGGAA GAAAAACGCA TCGGTGTGCT TGAAATACCA
AGCTTCTATC TAAACTATCA AGCCCGCCGC AGTGGTCAAA ACTACCGCAG CGTGAGTATC
GACACTCAAA AAGAGCTTGA GAAGCTTGAT AAAGAAAACA TTGACGGCCT GGTGGTCGAT
CTACGCAATA ACCCTGGCGG CTCCTTAGAT GAAGTGGCTA AAATGCTGGG ATTATTTATT
AAAGAAGGGC CGCTGGTTCA GATTCGTGAC AACCAGGGTA ACGTGCAAGT CTATCAAGAC
GAAGATGGTG GTAAGCAGCT GTATTCAGGC GATATGGTGG TCATTACCAA TATGGCATCA
GCCTCTGCCT CTGAGATTTT CGCCGCTGCC ATTCAAGACT ATGGCCGCGG CTTAGTAGTG
GGTAGTACCA CCACCGGTAA GGGCTCAGCT CAGATTCAGT TAGATAGTCT GGCCTTAGGC
TCAGCCACGT TGACTCAGCG TAAGTTTTAT CGCATTACAG GCGGCAGTAC CCAGAATAAA
GGGGTAGTGC CTGATGTGTC TTTAGTCAAT ATCTATGAAG GTGCTGAATT TAGTGAGCGC
GACCAAAAAA ATGCCATGGC TTGGGATACC ATCAAGACCT CGCCTTATAA GCCTGAAGGC
AAATTTAGCA GTAAGACGTT AGCGACCTTA AATCAGCAGT CCAAGATTCG TCAAACCACC
AATCCGCAGT TTGTTTATCT AGATACGCTA AATAAATTAC GCAATATGGA AGATGACAAA
AATGCGGTTA AGCTAAATAT CACTGAGCGC CGCGCACATC AAAAACAGAT TGAGCAAAAA
ACTTTAGATG CAGAAAATGC ACGTCGTAAG GCCACCGGTC AAAAGCCTTA TGCCAGCTGG
ACTGAGTATC AAGCTGCTGT CGAAGCCATG TTCGAAGAGC GCAGTCGTCT AAAAAATGAT
GAGCGTCCTA AGCTACCAGA AGAAGAGGCA TACGTGATTG AAGCGGCCAA GCTGATGCTT
GATGCCCGTA AGCTGCAAAA GTTCGATGAG CTACGCAGCG CCAAGTAG
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| Protein sequence | MRFQPTQLVL SAAAIGMAGV VLSHSYSSAV AADKSAFVAT PEQKLTTRQV AALLDRAHYS
NKRFDEAMGR KVLDMYFDRL DPNHTLFLQS DINELTTKYG ATFADRLKQG DLSAVQAIFN
RYTQRSNEYY NFADKFLSKP VNLNRNDSVV LDREKEPRFK SASEQQGYWG RQLTLQIINL
TLGQEEDKAR DELYTKNPEL TKGNDLILGE DRSPQEILLN RLHRQQEQLQ RIKSDEIMES
VLNTATLTYD PHSNYYAPVQ SVEMQVQSNL QLEGIGVSIR PYRKNPDYTQ IVTLVDGGPA
AKSGKVQPND LIMAVAKDGE NMQDVVGWST REVVALIRGK RGTDVTIKVK QPNSPDASAR
TIVITRDVIE QEDAGVTHRV ITVKPEGSTE EKRIGVLEIP SFYLNYQARR SGQNYRSVSI
DTQKELEKLD KENIDGLVVD LRNNPGGSLD EVAKMLGLFI KEGPLVQIRD NQGNVQVYQD
EDGGKQLYSG DMVVITNMAS ASASEIFAAA IQDYGRGLVV GSTTTGKGSA QIQLDSLALG
SATLTQRKFY RITGGSTQNK GVVPDVSLVN IYEGAEFSER DQKNAMAWDT IKTSPYKPEG
KFSSKTLATL NQQSKIRQTT NPQFVYLDTL NKLRNMEDDK NAVKLNITER RAHQKQIEQK
TLDAENARRK ATGQKPYASW TEYQAAVEAM FEERSRLKND ERPKLPEEEA YVIEAAKLML
DARKLQKFDE LRSAK
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