| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0305 |
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| Symbol | clpX |
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| ID | 5205256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 363423 |
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| End bp | 364700 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640598515 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001279210 |
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| Protein GI | 148652117 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000166273 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.865898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGG ACAAAACACC ACAGTGTTCA TTTTGTGGTA AAAAGAAAGA CGAAGTTGCC
CAGCTGATTG CAGCGGATGA CGCCAATATC TGTAATGAAT GTGTGGCGCT ATGCACAGAC
TTAATTGAAG AGGGCGACTT AAATACTGTC GACTCAGAAG ACGGTGAAGT GAACACGTGG
CTGACCAAAA AGCTGCCTAC GCCAAAAGAG ATTCGTGAAC ATCTAGATGG TTATGTGATC
GGTCAAGAAA CCGCCAAAAA GGCGTTATCA GTGGCCGTTT ATAACCATTA CAAACGCTTA
AAAGTAGCCG CTAAATTGGC CGAAGATAAA AAGCAGGCCA AACTGGGCGC TGATGATGCC
ATGGTTGAGC TGTCAAAAAG TAACATCTTG TTGATTGGTC CTACCGGCTC GGGTAAAACC
TTATTGGCGC AAACCCTAGC ACGTATGCTG GATGTGCCGT TTGCGATGGC CGATGCCACC
ACCTTAACCG AAGCCGGTTA TGTGGGTGAA GACGTTGAAA ATATCGTACA AAAGCTGTTG
CAAGCTGCTG ATTATGATGT CGAAAAAGCG GAGCAAGGCA TTATCTACGT CGATGAGATT
GACAAAATCA GTAAAAAAGG CGAGAACATG TCTATCACCC GTGACGTATC GGGCGAAGGC
GTGCAGCAAG CGCTACTCAA ATTAATTGAG GGCACGGTTG CTGCCATTCC ACCCCATGGT
GGCCGCAAAC ATCCCAATCA AGAGCTTATC CAAGTTGATA CCAGTAATAT CTTAATTATT
GTTGGCGGTG CTTTCTCAGG TCTTGATAAA GTCATTCAGC AGCGTACCGA GAAAACTGGC
ATTGGTTTTA ACGCTGAAGT TAAGTCAAAA GATGATGGTA AGCAATTGTC TGAACTGTTT
AAGCAAGTAG AGCCTGAAGA TCTGATTAAA TTTGGTCTTA TTCCAGAATT AATCGGCCGT
CTACCAGTCA TAGCAACGCT TGAAGAGCTC GATGAAGAGG CATTAATGCA GATTTTAACT
GAGCCGAAAA ACGCCATTGT TAAACAGTAC CAGTACTTGT TTGAAATGGA AGATGCTGAG
TTAAGCTTCA CTGAAGCGGG ACTAAAAGCC ATTGCTCACA AAGCAATGGA GCGTAAAACA
GGTGCCCGTG GTCTGCGTTC AATCGTAGAG AACGCACTGC TAGATACCAT GTATGAGCTG
CCTTCTATGA GCGATGCGAA GCAGGTTGTG GTCGATGAAG ATGTTATCAA TGAGGGCGCA
GCCCCTAAGA TTGCTTAA
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| Protein sequence | MAKDKTPQCS FCGKKKDEVA QLIAADDANI CNECVALCTD LIEEGDLNTV DSEDGEVNTW
LTKKLPTPKE IREHLDGYVI GQETAKKALS VAVYNHYKRL KVAAKLAEDK KQAKLGADDA
MVELSKSNIL LIGPTGSGKT LLAQTLARML DVPFAMADAT TLTEAGYVGE DVENIVQKLL
QAADYDVEKA EQGIIYVDEI DKISKKGENM SITRDVSGEG VQQALLKLIE GTVAAIPPHG
GRKHPNQELI QVDTSNILII VGGAFSGLDK VIQQRTEKTG IGFNAEVKSK DDGKQLSELF
KQVEPEDLIK FGLIPELIGR LPVIATLEEL DEEALMQILT EPKNAIVKQY QYLFEMEDAE
LSFTEAGLKA IAHKAMERKT GARGLRSIVE NALLDTMYEL PSMSDAKQVV VDEDVINEGA
APKIA
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