Gene PsycPRwf_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0287 
Symbol 
ID5206010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp341796 
End bp342761 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID640598497 
Productaldose 1-epimerase 
Protein accessionYP_001279192 
Protein GI148652099 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCATA CTGTTTTGTC CAGCCCAGCC GCCACAGTTA AACGTATTAA AATTGGCGCA 
CTAGATGCCC TAGATATCCG TGCTCCGGCG TATCAAGCGG TTGTATTACT ACAAGGTGCT
CAGCTGATTT ATTTTTCTAG CGGCAAGCTG CCCACAAAAG ACTTTGAGCA ATTAGCGCCG
CAGCATGTTA GCGATAACTG GCTGTGGGTC AGCGCGCAGG CCCAATACGA CACTCAAGAT
TCAGTGCGAG GCGGTGTGCC TCTATGTTGG CCGGTATTTG GGTTGTTTAG TGCCAATCCT
GAAGCGGTTA AAACAAGCTT TAAAGATAGC CTGTATGATG TAACTCAGCA TGGCTATGCC
CGCACACAGA TTTTTGATTT TGAGCGCTTT AGCAGTGAGA TTGGTGATAA TAAGACCTCA
GAGCTGGTAT TAATGCTGAC AGGATCCAGA TCGCCCAAGC TAGATTTGAC AGTGACATTT
AGCTTTAATG ATCAGGGTGT TAACATTAAG CTGACCACCC AAAATCAAGA GGCGCATACT
GTGCATTTCT CGCAGGCGCT GCATACCTAT TTGCCCACTG CGGATATTAC GCAAACGGTG
ATTGGTGGCT TTGATGGTGT CAATTATAGT GATACGCTAC AGACAGATGC GACAAATGGT
GGCTGGCAAA CCAAGACCCA GCAAGGTGAT ATCAGCTTTG AGGGTGAAGT TGACCGTATC
TATCACGGCG CGCCAGACAT CACCCTCACC ACCCCTACCC AGCGCTATCA GCTTATCGCT
ACAGGCAGCA ATAGTACGGT TGTTTGGAAT CCGTGGATCA AAAAGGCCAA GCAGGTCAGC
CAATTTGCCG AGGATGACTA CCTACGTATG CTGTGTATCG AGACCGCCAA TGCCCATTTG
GATGCCGTCA CCTTGCAATC AGGCCAAACC CACAGCTTAA GCTTAAGCCT ATCCCAAGCT
CATTAG
 
Protein sequence
MPHTVLSSPA ATVKRIKIGA LDALDIRAPA YQAVVLLQGA QLIYFSSGKL PTKDFEQLAP 
QHVSDNWLWV SAQAQYDTQD SVRGGVPLCW PVFGLFSANP EAVKTSFKDS LYDVTQHGYA
RTQIFDFERF SSEIGDNKTS ELVLMLTGSR SPKLDLTVTF SFNDQGVNIK LTTQNQEAHT
VHFSQALHTY LPTADITQTV IGGFDGVNYS DTLQTDATNG GWQTKTQQGD ISFEGEVDRI
YHGAPDITLT TPTQRYQLIA TGSNSTVVWN PWIKKAKQVS QFAEDDYLRM LCIETANAHL
DAVTLQSGQT HSLSLSLSQA H