Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0252 |
Symbol | |
ID | 5205014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 295143 |
End bp | 295574 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640598462 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001279157 |
Protein GI | 148652064 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.796574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00298229 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGTTTG AAAACATCTT GGTGGTGTGT GTGGGTAATA TCTGCCGTAG CCCTATGGCA GAAGCGTTAT TAAAGCAGCG CTTTCCTGAT AAAAACATTG ATTCTGCAGG TGTTGGGGCT TTGGTCGGTC ATGGAGCCGA TCCTGCGGCT ATCGAAATTA TGCAGCAGCA AAATATTGAT ATTACCGATC ATGTTGCTAA GCAAATAGAT GAAGATCTGG CTCTAAAATA TGATTTAATA CTCACCATGT CTGCTGGACA AAATAAGTGG ATTGAAGAAC GCTTCCCTTT TTGCCGCGGT AAAACCTTTA AACTGGGTCA CTGGCGTGAT AAAGATATTG CCGACCCTTA CAAACATGAG ATGAGTGCAT TTAAAACGGC ATATCAAGAT ATCGTAAAAG GTATAGAGGA CTGGCAGGAT AAAATAAATT AA
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Protein sequence | MAFENILVVC VGNICRSPMA EALLKQRFPD KNIDSAGVGA LVGHGADPAA IEIMQQQNID ITDHVAKQID EDLALKYDLI LTMSAGQNKW IEERFPFCRG KTFKLGHWRD KDIADPYKHE MSAFKTAYQD IVKGIEDWQD KIN
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