Gene PsycPRwf_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0252 
Symbol 
ID5205014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp295143 
End bp295574 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content41% 
IMG OID640598462 
Productprotein tyrosine phosphatase 
Protein accessionYP_001279157 
Protein GI148652064 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.796574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00298229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGTTTG AAAACATCTT GGTGGTGTGT GTGGGTAATA TCTGCCGTAG CCCTATGGCA 
GAAGCGTTAT TAAAGCAGCG CTTTCCTGAT AAAAACATTG ATTCTGCAGG TGTTGGGGCT
TTGGTCGGTC ATGGAGCCGA TCCTGCGGCT ATCGAAATTA TGCAGCAGCA AAATATTGAT
ATTACCGATC ATGTTGCTAA GCAAATAGAT GAAGATCTGG CTCTAAAATA TGATTTAATA
CTCACCATGT CTGCTGGACA AAATAAGTGG ATTGAAGAAC GCTTCCCTTT TTGCCGCGGT
AAAACCTTTA AACTGGGTCA CTGGCGTGAT AAAGATATTG CCGACCCTTA CAAACATGAG
ATGAGTGCAT TTAAAACGGC ATATCAAGAT ATCGTAAAAG GTATAGAGGA CTGGCAGGAT
AAAATAAATT AA
 
Protein sequence
MAFENILVVC VGNICRSPMA EALLKQRFPD KNIDSAGVGA LVGHGADPAA IEIMQQQNID 
ITDHVAKQID EDLALKYDLI LTMSAGQNKW IEERFPFCRG KTFKLGHWRD KDIADPYKHE
MSAFKTAYQD IVKGIEDWQD KIN