| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0243 |
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| Symbol | |
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| ID | 5206069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 283023 |
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| End bp | 284441 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640598453 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001279148 |
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| Protein GI | 148652055 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.117195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGA ATAAAAAAAC TATCTTAAAT TATGCTATAG GTCCTATAGG TTCAGGAATA
CTGGGACTAG TATCACTTCC AATAATTACT TGGTTCTTCT CAGTAGAAGA TGTTGGCCGG
ATATCAATGC TCCAAGTGGT AGTCAGCTTC TCTGTGCTAC TGTTCTGCTT GGGTCTTGAT
CAAGCGTATG TGCGAGAATA CCATGAAGCA GAGGCTACTC CTGAGCTATT AAAGCTTACT
CTATTACCTG GGCTAATATT AACTTTAGCG GCTTATAGCT TAATATTTAT TATAAACCCT
ACTTTAGTTT CTCATTGGCT ATATGAAATT CCGAGTGTGT ATCTGAGTTT CATTAGTATC
ACATGTCTTG CTATAAGTAT TATTTCTAGG TTTTTATCTT TAGTACTGCG TATGCAAGAG
CGGGCACTTG CATACTCAAT GAGCCAATTG CTTCCTAAAG TTATATTCTT GATATTCGTT
ATTTCTACGG TCTGGTTAGG GTTTAAAAAA GATATTTACA CCTTAGTTAC AGCCCATTTT
CTATCTATAC TCTCAGTGTT TATACTGTTT TCATGGAATA CTCGAAAAGA GTGGCTCGGT
TCGTTTGAGT ATAAGTTTAA TTGGATACGG TTTAAGCCAT TATTGCTATA TGGCCTACCC
TTAGTGATAG GTGGGTTAGC TTCTTGGGGT TTAAATGTAA TGGATCGGCT ATTTTTACGT
AGCCTTTCAA CATTTACTGA GCTTGGTATT TACTCAGTTA CCATGAGTAT TGCAGCTGTT
GCTACTGTCT TTTCGGGGAT ATTTAATACG ATATGGGCCC CTTTGGTCTA TAAATGGGTT
AAAGCCGATG ATGTTAATCT CAATAAAATG GATGAGATAT CCGAGCATTT ACTAGCTGCT
ATTTATTTTA TAGTTGTTTT ATCTGGTCTG TTTTCTTGGA TACTGCCATT TTTCCTTCCT
AAAGAATATG CAGCAATACG ATATTTGATT ACACTGTGCT TATTAGCACC ACTTTTTTAT
ACTCTTTCAG AGACAACAGC AGTAGGTATT ACTATTGCCA GAAAGACTAG CTACTCCATG
CTTGCTTCTA TCTTAGCTAT GTTAACTAAC GCCTTAGGCA ACTATCTATT AGTGCCTAAA
ATGGGGGCTT TAGGGGCAGC TATTTCTACC GCTATCTCAT TTTGGTTATT TTATATTTTA
AGAACTGAAT TATCCTGTAG AGTGTGGAGA CAAATACCTA AGTTTAAAAG TTATTTGATT
GTTTCATTCT TACTTATTAC TACAGCTTTC AGCTCAATGC TTATGAGCAA GTATCCTATA
TTAATAACTA CTTGGTTCTT TGCGCTTATA ATAGGTATAT ATATATTTAA TCCTAGTATA
AAACTGGCGT TCCAACAGAT AAATAAGATA CGAGTATAA
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| Protein sequence | MAMNKKTILN YAIGPIGSGI LGLVSLPIIT WFFSVEDVGR ISMLQVVVSF SVLLFCLGLD
QAYVREYHEA EATPELLKLT LLPGLILTLA AYSLIFIINP TLVSHWLYEI PSVYLSFISI
TCLAISIISR FLSLVLRMQE RALAYSMSQL LPKVIFLIFV ISTVWLGFKK DIYTLVTAHF
LSILSVFILF SWNTRKEWLG SFEYKFNWIR FKPLLLYGLP LVIGGLASWG LNVMDRLFLR
SLSTFTELGI YSVTMSIAAV ATVFSGIFNT IWAPLVYKWV KADDVNLNKM DEISEHLLAA
IYFIVVLSGL FSWILPFFLP KEYAAIRYLI TLCLLAPLFY TLSETTAVGI TIARKTSYSM
LASILAMLTN ALGNYLLVPK MGALGAAIST AISFWLFYIL RTELSCRVWR QIPKFKSYLI
VSFLLITTAF SSMLMSKYPI LITTWFFALI IGIYIFNPSI KLAFQQINKI RV
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