| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0214 |
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| Symbol | |
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| ID | 5205477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 252948 |
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| End bp | 255470 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640598428 |
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| Product | trimethylamine-N-oxide reductase TorA |
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| Protein accession | YP_001279123 |
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| Protein GI | 148652030 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TCAATCGCAG GGGCTTTTTA AAATCGCTGG CGGCTTTGTC GGGTACGGCG
CTACTCCCTA CGCCGCTGTT GGCCGATGAC AGCGTATTGA CCTCAGCCAC AGGCGACAAA
CCGCAAGACT TTAGTGGCTG GAAAATGTCC GGCGCACACT GGGGTGCTTT TCGTGCTCGA
GTTGAGGCGG ACAAGCTGGT GGAAATCAAA CCGTTTGAGT TTGATCAATA TCCCACTAAG
ATTTTAGATG GCGTACCGGG CATTATCTAC AGCCCTTCAC GGGTACGCTA TCCGATGATT
CGCGTCGACT GGTACAAAAA CCGTCAAAAC AGCGACACCT CACAGCGCGG CGACAACCGC
TTTGTGCGTG TTAGCTGGGA TGAGGCGTTA GACATCTTGT ATCAAGAGCT TGAGCGCATT
CAAAAAGACT ACGGGCCTTG GGCACTACAC ACCGCGAACG TGGGCTGGCG CTCGGTAGGT
AACGTGCACA GCTGTGGTAA CCACATGCTG CGTGCCATTG CCATGCACGG CCACAGTGTA
GGGACAGCAG GGGATTACTC AACTGGTGCC GGTCAGATGA TTTTGCCATA TATCTTGGGC
TCCACTGAGG TGTATTCGCA AGGGACGTCT TGGCCACTGA TTTTAGAAAA TGCCAAAGTG
ATTATCTTCT GGGCCAACGA CCCGATCAAA AACTTACAGG TCGGCTGGAA CACTGAGACC
CACGAAGCTT ATGAATACTA CGAGATCTTG CGTGACAAGG TTCGCAACAA AGAGATCGAA
GTGATCTGTA TCGATCCGGT GAAGAGCAAG ACGCAAAACT ACCTAGAGTG TGAGCATCAA
TTCGTCAATC CTATGACAGA CGTGGCATTT ATGCTGGGTC TGGCGCACAC GTTATACACC
GAGAAGCTGT ATGACAAAAA GTTCATCGAC ATGTATGCGT TGGGGTTAGA GGAATTCACC
CCTTACTTGA TGGGTAAGAC CGAAGACAAG GTGGAGAAGA CCCCTGAGTG GGCTGAGAAA
ATCTGCGGCG TAAAAGCCGA TAGAATTCGC GAATTGGCAC GTAAAATGGC CAAAAACCGT
ACTCAGCTTT GCTTTGGCTG GGCCATTCAG CGTCAGCAGC ACGGTGAGCA GCCGTATTGG
ATGGGGGCGA TTATCGCAGC GATGCTGGGT CAAATAGGTC TGCCAGGTGG CGGTATCAGT
TATTCACACC ACTACAGCTC TGTGGGTGTG CCGACCTCTG GCGCCTCTAT GCCAGGCGCG
TTCCCACTAA ACTTAGACAC TGGCCGTAAG CCTAAATATG ACAATAACAA TTACAATGGC
TACAGCTCTG TCATTCCGGT TGCGCGTATG GTGGATTGTC TGCTTGAGCC TGGTAAGAAG
ATTAACTTTA ATGGCCATGA AGTGACCCTA CCACCGCTGA AAATGGGGAT CTTTACGGGC
AGTAACCAGT GGCACCGTCA CCAAGATCGC AACCGCATGA AAAAAGGCTA TCGCAATATG
GAGACCGTGG TATCCGTTGA TTATAACTGG ACCGCCACCT GCCGTTTCGC TGATATCGTA
TTGCCGGCCT GTACCCCTTA TGAGCGTAAC GACATTGACG CTTATGGCTC GTACAGTAAC
CGAGGCGTGA TTGCGATGCA CAAGCTGGTA GACCCCTTGT ACCACTCTAA GTCTGACTTT
GAAATCTGGT ATGAGTTCAC CAAGCGTATG GGCCGTGAGC TTGAGTATAG CCGGGCGATG
AATGAGATAC AGTGGATTGA GCAGATTTAT GAGGACTGCC GTGCTGAGAA CCTAAAAAAA
GACTTCTTTA TGCCGGAGTT CAAAGAGTTC TGGGAAAAAG GCTATGTGTT ATTCCCAGAA
GGGGAGAACT GGGTACGTCA CGCAGACTTC CGTGAAGACC CTGAAGTCAA CGCACTGGGC
ACGCCATCAG GCTTTATCGA GATCAGCAGC CGCAAGATTG CCAGCTACGG TTATGCAGAC
TGTAAAGGTC ATCCTATTTG GATGGAAAAA GCCGAGCGCT CACACGGTGG CCCAGGCTCA
GATAAGTATC CGTTATGGCT ACAATCGGTG CACCCAGACA CCCGCTTGCA CTCACAGACC
TGTGAGTCTG AGGAGCGCCG TGTTACGTAT ACCGTTCAAG ACCGTGAACC TTGCTATATC
GGCCCTGAAG ATGCCAGAGC ACGAGGGATT AGCGATGGTG ACTTAGTCCG TGTGTTTAAT
GACCGAGGGC AGCTGCTTGC AGGCGCCGTC ATCTCTGATA ACTTCCCACC TGGCGTCATT
CGTATTCAAG AAGGCGCTTG GTATGGCCCG ACCGGCCCTG AAATTGGCGC CCTGGATACC
TATGGAGATC CCAATACCTT GACCTTAGAT ATCGGGACTT CGATGTTGGC GCAGGGCCCA
AGTGCCAATA CCTGCTTGGT TGAGATTGAA AAATTCGTCG GCAAAGCGCC AGCGGTGACC
TCCTTTGGTG GTCCCACTTA TGTCAATCCA GACGGCACGC CAGCGGCAGA AGACAAAGGC
TAG
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| Protein sequence | MKNINRRGFL KSLAALSGTA LLPTPLLADD SVLTSATGDK PQDFSGWKMS GAHWGAFRAR
VEADKLVEIK PFEFDQYPTK ILDGVPGIIY SPSRVRYPMI RVDWYKNRQN SDTSQRGDNR
FVRVSWDEAL DILYQELERI QKDYGPWALH TANVGWRSVG NVHSCGNHML RAIAMHGHSV
GTAGDYSTGA GQMILPYILG STEVYSQGTS WPLILENAKV IIFWANDPIK NLQVGWNTET
HEAYEYYEIL RDKVRNKEIE VICIDPVKSK TQNYLECEHQ FVNPMTDVAF MLGLAHTLYT
EKLYDKKFID MYALGLEEFT PYLMGKTEDK VEKTPEWAEK ICGVKADRIR ELARKMAKNR
TQLCFGWAIQ RQQHGEQPYW MGAIIAAMLG QIGLPGGGIS YSHHYSSVGV PTSGASMPGA
FPLNLDTGRK PKYDNNNYNG YSSVIPVARM VDCLLEPGKK INFNGHEVTL PPLKMGIFTG
SNQWHRHQDR NRMKKGYRNM ETVVSVDYNW TATCRFADIV LPACTPYERN DIDAYGSYSN
RGVIAMHKLV DPLYHSKSDF EIWYEFTKRM GRELEYSRAM NEIQWIEQIY EDCRAENLKK
DFFMPEFKEF WEKGYVLFPE GENWVRHADF REDPEVNALG TPSGFIEISS RKIASYGYAD
CKGHPIWMEK AERSHGGPGS DKYPLWLQSV HPDTRLHSQT CESEERRVTY TVQDREPCYI
GPEDARARGI SDGDLVRVFN DRGQLLAGAV ISDNFPPGVI RIQEGAWYGP TGPEIGALDT
YGDPNTLTLD IGTSMLAQGP SANTCLVEIE KFVGKAPAVT SFGGPTYVNP DGTPAAEDKG
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