| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0213 |
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| Symbol | |
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| ID | 5205476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 251656 |
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| End bp | 252891 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640598427 |
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| Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
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| Protein accession | YP_001279122 |
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| Protein GI | 148652029 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.460429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAA TTAAACGCCT ATTTGGTTGG CTGCGTCAGC TTCTATTTAA ACCGGCTGCA
AAAATTGGGC TTGGTGTATT AATTATCATC GGCTTCGTAG GCGGGGTATG GTTTTGGGCA
GGCTTTAACT CAGCGCTAGA AGCGACAAAT AGCGAAGAGT TCTGTTTGTC TTGTCATACC
ATGAAAGACA ACATGCTGCC TGAGCTACAA AAAACGGTGC ATTGGCAAAA CCGCACTGGG
GTGCGTGCTG AGTGTCAAGA TTGTCACGTG CCACACCAGT TCACCGATAA GATTGCCCGT
AAGATGCAGG CCTCGCGTGA AGTGTTGTCA CACGTTATGG GTGATATCGG TACACGCGAT
AAGTTCTTGG CACACCGCGG GGTATTGGCG CAGCGTGAAT GGGCTCGGTT TAAGGCGAAT
AACTCAAAAG AGTGCCGCGC TTGTCACGAC TATGACAGCA TGGACTTTAG CAAAATGCGC
GTGACCTCAC AGATGATTAT GCGTAGCGCC GCTGAGCGTG ATGCCAGCTG TGTTGACTGT
CACAAAGGGA TTGCGCACGA ATTACCAGTT ATGGAAGGCA TGCACAACCC CGCGTTCGAC
TCTTTGGTAT CTGAGGCGGG CAGCACCAAG ATTAATGTGG GCGAAACTTA CTATAACATC
GTGCCGCAAC CTTTATATTT AGATGCTGAA AAAACCAAGC AAGCGGGCAC CATTGAAGTG
GCAGCTCCTG CAAAAGTTAT TGCCCACGAA AAAGGCATGA CTCAAATTGA GCTGGATATG
TGGCGTAAGA ACAAGGGCTT CGGCCGAGTT TGGTACACCC ACTTTGGCCT AAACATTGTC
GATGCCGTCA TTGAAAAAGA TCTGTCTCGT GATGAGAGTA TTGTGAAGGT AAAAGAGTCC
AAAGAGGATC CTTTAACCGG TCTTGAATGG CAAAAAGTCA GCGGTACCTT CTGGGTAGAA
GATGGCCTAT TAATGAAGAG TCTAGAGCCT GCTTGGGACA TCGCCGGACA GACTTATGCA
GAGAACTGTA GTGTGTGTCA CCGTCAACCA AACCCAGCCT CGCATGATGC CAACCAGTGG
CCAGGGCTAT GGAGTGGTAT GGTTGGATTT ACCAACCTCG ACGCAGATAC TGGTGGCTTA
GTACTCAAAT ATCTACAGCT GAACTCATCT GACTTTGCGG GTGCCAAAAA TGCCCCAGGC
TCACCTGAGA ATACGCCTCA GATGGCTCGT CCATAA
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| Protein sequence | MNAIKRLFGW LRQLLFKPAA KIGLGVLIII GFVGGVWFWA GFNSALEATN SEEFCLSCHT
MKDNMLPELQ KTVHWQNRTG VRAECQDCHV PHQFTDKIAR KMQASREVLS HVMGDIGTRD
KFLAHRGVLA QREWARFKAN NSKECRACHD YDSMDFSKMR VTSQMIMRSA AERDASCVDC
HKGIAHELPV MEGMHNPAFD SLVSEAGSTK INVGETYYNI VPQPLYLDAE KTKQAGTIEV
AAPAKVIAHE KGMTQIELDM WRKNKGFGRV WYTHFGLNIV DAVIEKDLSR DESIVKVKES
KEDPLTGLEW QKVSGTFWVE DGLLMKSLEP AWDIAGQTYA ENCSVCHRQP NPASHDANQW
PGLWSGMVGF TNLDADTGGL VLKYLQLNSS DFAGAKNAPG SPENTPQMAR P
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