| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0195 |
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| Symbol | |
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| ID | 5206317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 230778 |
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| End bp | 231884 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640598407 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001279104 |
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| Protein GI | 148652011 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000522338 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00591521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACCC TCAAGCTACG CATCAAAGAC AAACATGCAA ATCAGCTAAA CAAACTAGCT
GGGAGTATTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC
ACAGGTAAGT ACTTTTCGGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGTGAGTAT
TTAGGCTTGC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTTATGCCAA ATCTCGTAAA
CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGAAAAAGC
TTAGGTTGGA TACCTTTTAA GAAATCTGCC ATAAAGTACC TAAATACAAG ACAAACGGGA
AAGAAAACAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATA
GACGTATTCG ATAGCTACAA TTTGTCTTTG TATCAAATCA ATACGCTTGA GATAGTGCAA
GACAGCCGTA ATCGCTGGTA TGCCTGTATT ACCGTCAAAG ATTTTCCTAG ACAAGCAAGT
GGTAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGGAGT CTGCTACCAC ATCAACGGGC
GATAAACTAC AGATTAAGCA GACTCAAAAA TGGGCGAATA AATTAGCAGT CGCCCAGCGT
GCAAACAATA AAAGCCGGGT AAAGGCAATA CACGCCAAGA TCAAAAACTC AAGATTAGAC
GCAATACACA AATTCACTAC CCAATTAGTT AAGGATAATG CTTTAATTGT GGTTGGTGAT
GTTAAATCAC GCTCATTTAC CAATTCGATG ACCAACCTAG CTAAATCAAC ATACGATGCA
GGATGGTTTG AACTCAAAAG ACAACTAGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT
GAGATAGTGA ATGAGAGTTA CACTACCCAG ACCTGCTCGT GCTGCCACAA AATAAGTGAT
AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT
CTAGCTGTAG CAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHANQLNKLA GSINYAWNYV NALSFEHLRR TGKYFSAYDL SQYTKGSGEY
LGLHSQTLQA INETYAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLNTRQTG
KKTLKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPRQAS
GKGSVGIDLG LKESATTSTG DKLQIKQTQK WANKLAVAQR ANNKSRVKAI HAKIKNSRLD
AIHKFTTQLV KDNALIVVGD VKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL
EIVNESYTTQ TCSCCHKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR
LAVAIPSV
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