Gene PsycPRwf_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0192 
Symbol 
ID5204543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp227691 
End bp228572 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content42% 
IMG OID640598404 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_001279101 
Protein GI148652008 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.865487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0103417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGTT TAAAAGAAAT TCGTGCTAAG GTTACCAGCA TCAAGAGTAC GCAGAAGATT 
ACGCGTGCGA TGCAGATGGT AGCCGCCAGT AAAATGCGCC GTGCCCAAGA GCGTATGGAA
GTTGGTCGTC CTTATGCTGA AAGTATGCGC CGTGTGGTCT CACACTTAGT GAATGCTTCT
TCAGATTATA AGCATCCTTA TATGACTAAC CGTTCGGTAA ATCGTGTTGG CTATATTCTA
GTGACTTCTG ATCGTGGTTT GGCAGGTGGG TTAAACATTA ACTTGTTTAA AAAGTTAATG
CACCACGTTC AAGAATTTCA AAATCAGTCT GTTGAAGCTG AGTTTGCTGT AATTGGCTCT
AAAGGCGTCA GCTTCTTTAA GAGCTTTGGC GGTAAAGTAA CTTCAGCAGT CACTGATTAT
GGCGATAATC CAACATTTGA GCAGTTAAAT GCTCCTGTTC AAGCCATGCT TGATGATTAT
GCTAATGGTC GTCTAGATCG TATTTACATG GTTTACAATA AGTTTGTTAA CGCGATGACG
CAACAACCTA TTGTTACCCA ATTGGTTCCT CTACCAGACA GTGCTATTGA CTCTGCAGAT
GCTGGCATCA ATACAGAGCT TAGCTGGGAC TATATCTACG AGCCTGATGT GAAGACATTG
ATTGATGGTT TGCTTAATCG TTATATCGAA TCAATTGTTT ATCAAGCGGT CATGGAAAAT
ATTGCCTCTG AGCAGTCGGC ACGTATGGTT GCAATGAAAG CAGCAACTGA TAACGCTGGT
GACCTAATTA ATGATTTACA GTTAGTTTAT AACAAGCTGC GTCAAGCGGC AATTACCCGA
GAGATTTCGG AGATTGTCGG CGGTGCTGCT GCTGTTTCCT AA
 
Protein sequence
MASLKEIRAK VTSIKSTQKI TRAMQMVAAS KMRRAQERME VGRPYAESMR RVVSHLVNAS 
SDYKHPYMTN RSVNRVGYIL VTSDRGLAGG LNINLFKKLM HHVQEFQNQS VEAEFAVIGS
KGVSFFKSFG GKVTSAVTDY GDNPTFEQLN APVQAMLDDY ANGRLDRIYM VYNKFVNAMT
QQPIVTQLVP LPDSAIDSAD AGINTELSWD YIYEPDVKTL IDGLLNRYIE SIVYQAVMEN
IASEQSARMV AMKAATDNAG DLINDLQLVY NKLRQAAITR EISEIVGGAA AVS