Gene PsycPRwf_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0184 
Symbol 
ID5204572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp220278 
End bp220856 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content49% 
IMG OID640598396 
Productferric uptake regulator family protein 
Protein accessionYP_001279093 
Protein GI148652000 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0654518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00635481 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGTAT CTAGTAATGC CCCTGACGCA GTAATTAGCG CCCCCTGTGA CCATCATGGC 
CCACACTTGC ATGATGTGCA TGCTTTAACT CAAGCCGAGA TTGAGAATCG GCTATTGGCT
GCTGAGCAAC TTTGTGCGAC TAAAGGCGCC CGTTTTACAC CCTTAAGACG CACCGTTTAT
CAGCTGATTT TGCAATCTGA TAAGCCGCTT GGTGCTTATG ACTTAATCCA AAGCCTGCAA
GACAGCCGCG CCCAAGATCA AGCCAATAAA GCCAAGATGG TGGCGCCGCC GACCATTTAT
CGAACCTTAG AGTTTTTGTT AGAATTCGGC TTTATTCATC AATTGACCTC ACTGAATGCC
TTTGTACCCT GTTGCCATCC CCGCGATGAG CACAATGCCG TATTCTTATT ATGCAATGAC
TGTCAGCGGG TACAAGAATG TAGCGGCATG CCCGTTCAGG AGATTTCAAG CTACGTGAAG
CAGCAAGTTG GCTTTGAGGT CAAACAAAGC GTGATGGAGC TTAAAGGGTT ATGCCATACC
TGCTCGCCAA GCCTAGCCGA TGCGGTAGTG CAAGGATAG
 
Protein sequence
MSVSSNAPDA VISAPCDHHG PHLHDVHALT QAEIENRLLA AEQLCATKGA RFTPLRRTVY 
QLILQSDKPL GAYDLIQSLQ DSRAQDQANK AKMVAPPTIY RTLEFLLEFG FIHQLTSLNA
FVPCCHPRDE HNAVFLLCND CQRVQECSGM PVQEISSYVK QQVGFEVKQS VMELKGLCHT
CSPSLADAVV QG