| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0178 |
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| Symbol | |
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| ID | 5205961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 214403 |
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| End bp | 215509 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640598390 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001279087 |
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| Protein GI | 148651994 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.116307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.116518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC TCAAGCTACG CATCAAAGAC AAACATGCAA ACCAGCTAAA CAAACTAGCT
GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC
ACAGGTAAGT GCTTTTCGGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGTGAGTAT
TTAGGCTTGC ACTCGCAAAC TCTGCAAGCC ATTAACGAGA CTCATACCAA ATCTCGTAAG
CAGTTTAAAA AAACTAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGCAAAAGC
CTAGGCTGGA TACCCTTTAA AAAATCAGCC ATCAAGTACC TAAATACGAG GCAAAGCGGT
AAAAAAGCAC TGAAATCAAC CATTCAATTA TCGCTCTGTA AAGGTCAAAA GCTTATCATA
GACGTATTCG ATAGCTACAA TTTGTCTTTG TATCAAATCA ATACGCTTGA GATAGTGCAA
GACAGCCGTC ATCGTTGGTA TGCCTGTATT ACCGTCAAAG ATTTTCCTAG ACAAGCAAGT
TGCAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGCAGT CTGCTACCAC ATCAACGGGC
GATAAACTAC AGATTAAGCA GACTCAAAAA TGGGCGAATA AATTAGCAGT CGCCCAGCGT
GCAAACAATA AAAGCCGGGT AAAGGCAATC CATGCCAAGA TCAAAAACTC AAGATTAGAT
GCCATACACA AATTCACCAC CAAGCTAGTT CAAAATAATG CTTTAATTGT GGTTGGTGAT
GTTAAATCAC GCTCATTCAC CAATTCGATG ACCAACCTAG CTAAATCAAC ATACGATGCA
GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGCATGCAGG TTGTCAGTTT
GAGATGGTAA ATGAGAGTTA CACTACCCAG ACCTGCTCGT GCTGTCTTAA AATAAGTGAC
AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCTGCT AACAACATCC TTGCGGTCGG GCTTGACCGT
CTAGTTGTAG GAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHANQLNKLA GSVNYAWNYV NALSFEHLRR TGKCFSAYDL SQYTKGSGEY
LGLHSQTLQA INETHTKSRK QFKKTKLNWR TNRPDAKRKS LGWIPFKKSA IKYLNTRQSG
KKALKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRHRWYACI TVKDFPRQAS
CKGSVGIDLG LKQSATTSTG DKLQIKQTQK WANKLAVAQR ANNKSRVKAI HAKIKNSRLD
AIHKFTTKLV QNNALIVVGD VKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKHAGCQF
EMVNESYTTQ TCSCCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA NNILAVGLDR
LVVGIPSV
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