| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0172 |
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| Symbol | |
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| ID | 5205781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 206272 |
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| End bp | 207525 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598384 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_001279081 |
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| Protein GI | 148651988 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000030893 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.412572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACC AGATTTTTGA ACTACAATAC GCTCTCGACA CCTTTTATTT TTTAGTGTGT
GGCGCCTTAG TCATGTGGAT GGCGGCAGGA TTTGCCATGC TAGAGGCAGG CCTAGTTCGC
TCTAAAAACA CCACCGAAAT TTTAACCAAG AACATCGGCC TTTTTGCCAT TGCTTGTACC
ATGTACCTCA TTTGTGGCTA TCATATTATG TATGATGGCG GCTTCTTCTT AAATGGTATT
GCTGGCGGCG AAACCCTCGT GGCTGATGCT TTAGCAGACT CTGCAAAAAA TGGTTTTGAG
GGAGATGCGG TTTATTCAGC TGCCTCTGAC TTCTTCTTCC AAGTGGTCTT CGTCGCTACC
TGTATGTCTA TCGTATCAGG CGCAGTAGCA GAACGTATGA AGCTGTGGGT ATTTTTCGCC
TTCGCTATTG TGATGACCGG ATTTATTTAT CCTATGGAGG GTAGCTGGAC TTGGGGCGGC
AATGCGGTAC CTTTTATTGG TGAGCTAAAC TTCGTCGATT TTGCAGGCTC AGGCATTGTT
CATATGGCGG GTGCAGCAGC GGCCCTAGCA GGCGTGTTGT TACTTGGCGC TCGTAAAGGA
AAATATGGCA AAAATGGCGA AATCCGTGCC ATTCCTGGGG CAAACTTACC CCTTGCTGCC
TTAGGTACCC TTATCTTATG GTTAGGTTGG TTTGGCTTTA ATGGCGGCTC TGTATTGAAG
CTTGGTGATA TTGCCAGCGC AAACTCGGTG GCAATGGTGT TCTTAAATAC CAATGCTGCT
GCTGCAGGTG GCGCTATCGG TGCTCTATTA CTTGCACGCT TAATCTTTGG TAAAGCTGAT
TTGACCATGC TCTTAAACGG TGCGTTAGCA GGTTTAGTTG CCATTACTGC AGGTCCAGAT
ACCCCAACAC CACTACTGGC CACTGTGTTC GGTATGATGG CAGGTATCAT TGTGGTTTGC
TCAATTCTAA TCTTAGACAA AATGAAAATT GATGACCCTG TTGGTGCTAT CTCAGTGCAT
GGCGTGGCCG GCTTCTTTGG GGTGATGATT GTGCCACTGA CCAATGATAG TGCCACGTTC
CTAGGTCAAT TAGGCGGCGC TGCGGTTATC TTCGGTTGGG TATTTGTGTG TAGCTTGATT
GTTTGGAGCG TGCTTAAAGC GGTGGTCGGT CTACGTATCT CTGAAGAAGA AGAGTATGAA
GGCGCTGATA TTGCTGAATG TGGTCAAGAA GCTTATCCTG AGTTTGTTAA CTAG
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| Protein sequence | MENQIFELQY ALDTFYFLVC GALVMWMAAG FAMLEAGLVR SKNTTEILTK NIGLFAIACT
MYLICGYHIM YDGGFFLNGI AGGETLVADA LADSAKNGFE GDAVYSAASD FFFQVVFVAT
CMSIVSGAVA ERMKLWVFFA FAIVMTGFIY PMEGSWTWGG NAVPFIGELN FVDFAGSGIV
HMAGAAAALA GVLLLGARKG KYGKNGEIRA IPGANLPLAA LGTLILWLGW FGFNGGSVLK
LGDIASANSV AMVFLNTNAA AAGGAIGALL LARLIFGKAD LTMLLNGALA GLVAITAGPD
TPTPLLATVF GMMAGIIVVC SILILDKMKI DDPVGAISVH GVAGFFGVMI VPLTNDSATF
LGQLGGAAVI FGWVFVCSLI VWSVLKAVVG LRISEEEEYE GADIAECGQE AYPEFVN
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