Gene PsycPRwf_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0164 
Symbol 
ID5205685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp193089 
End bp195203 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content46% 
IMG OID640598376 
Productpolynucleotide phosphorylase/polyadenylase 
Protein accessionYP_001279073 
Protein GI148651980 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 
TIGRFAM ID[TIGR03591] polyribonucleotide nucleotidyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATGT TTAATACCAT CTCTCGAGAG TTCCAGTACG GCAACGAACA AGTTGTTATT 
GAAACCGGTC GTATCGCACG ACAAGCCAAT TCAGTATTGG TTCATATGGG CGGCGTATCA
GTATTGGTCG CTGTGGTTGT AAAAAGCGAT GCTAAAGAAG GTCAAAACTT CTTCCCGCTA
ACCGTCAACT ATCAAGAAAA AATGTACGCT GCTGGTAAAA TTCCAGGCGC TTACGGCAAA
CGTGAAGGCC GTCCTACTGA GTTTGAAACC CTAACCTCAC GTCTCATTGA CCGTCCCATC
CGTCCTTTAT TCCCAGAAGG TTATGTCAAC GAGATCCAGA TTACTGCCAC AGTCATCTCA
AGTGACAAAA AGCACTATGC TGATATCGCT GCCATGATTG GTGCTTCAGC TGCACTTTCA
ATCTCAGATG CGCCGTTTAA TGGCCCTATT GGTGGTGCCC GCGTAGGCTT TATCAATGGC
GAATACGTGC TTAACCCCTC AATTGAAGAG TTAAAGAGCA GTGATCTTGA CTTAGTAGTG
GCGGGTACTA AATCAGCGGT ATTAATGGTT GAGTCAGAAG CTGCTGAGCT GTCTGAAGAC
CAAATGCTGG GCGCTGTATT GTACGGTCAT GAACAGCAGC AAATTGTTAT CGATAATATT
GCTGAGCTGG CCAAGGCCGT GGGAACTCAA AAACAAGACT TTGTGGCACC TGAGCTAAAT
GCTGAGTTAA AAGAAAAAGT AACCACACAG TTTGGTGAGC AAGTGGCTGA AGCTTATGCC
ATTAGCGATA AGCAAGCACG CTACGAAAAA CTAGATGAGA TCAAGGCTGC GGCTATTGAC
GCCTTAGCAG GTGACCCTGA GTCAGAAGAG TTTGCTGAAA AAGAAGCTCA AATTAAAGAA
ATCTATAATG ATCTAAAATA TCGCACCGTT CGTGACGCCA TTTTGTCAGG TAAGCCACGT
ATCGATGGTC GTGATTTAGA TACCGTTCGT GCGCTAGATA TTCAAGTAGG TGTATTGCCT
TACACTCATG GTTCAGCGCT ATTTACCCGT GGTGAGACGC AAGCTCTAGT CACCACGACT
TTAGGTAATT CACGTGATGT AAACTTGATT GACTCGCTAG CGGGTACTAT CCAAGATCAT
TTCATGCTGC ATTACAACTT CCCGCATTAT TCAGTGGGTG AAACTGGCCG TGAAGGCGTG
CCAAAGCGTC GTGAAATTGG TCATGGCCGT CTGGCTCGCC GTGGTGTTCA AGCCATGCTT
CCAGACAGCG ACCGCTTCCC ATACGTTATC CGTGTGGTGT CTGAGATTAC TGAATCAAAT
GGTTCGTCTT CAATGGCGTC AGTTTGTGGT GCCAGCCTTG CCTTAATGGA TGCCGGTGTG
CCGTTAAAAG CCCCAGTAGC TGGTATCGCT ATGGGTCTGG TCAAAGAAGG CGACCGCTTT
GCTGTCTTAT CAGATATCCT AGGTGATGAA GATCATTTAG GTGATATGGA CTTTAAAGTG
GCCGGTACTA AAGATGGTAT CACAGCCTTA CAGATGGATA TTAAGATTGA AGGTATCACC
TCAGATATCA TGGAAAAAGC ACTTGAGCAA GCTCATGCCG GCCGTATCCA TATCTTAAAT
GCCATGAACG AAGTATTGCC AGCCAGCCGT ACTGAAATCA ATGCCCATGC ACCAAACTAT
GCGGTCATCG AAATCAATTC TGATAAAATC CGTGATGTGA TCGGTAAAGG CGGCGCAACC
ATCCGTCAAT TAACCGAAGA CACCGGTGCG GTTATCGATA TTGATGACAA TGGTACCATT
CGTATCTTTG GTGAAAACAA AGCCGCGACC AAAGAAGCCA TCCGTCAAAT CGAAGCCATC
ACCGCTGAAG TGGAAGTGGG CAAAGTATAC AAAGGCACCG TTGCGCGCGT TGTAGACTTT
GGTGCATTCG TAACGGTTTT ACCAGGTACT GATGGTCTGG TACACATCTC ACAAATCGCT
GATGAGCGTG TAGAGAGCGT ATCGGATTAC CTAAGTGAAG GCCAACAAAT CAATGTGTTG
GTGCAAGATG TAGACAACCG TGGTCGCATC AAATTAACCA TGAAAGGCGT TGAGCAAGAG
CAGACTCAAG CTTAA
 
Protein sequence
MSMFNTISRE FQYGNEQVVI ETGRIARQAN SVLVHMGGVS VLVAVVVKSD AKEGQNFFPL 
TVNYQEKMYA AGKIPGAYGK REGRPTEFET LTSRLIDRPI RPLFPEGYVN EIQITATVIS
SDKKHYADIA AMIGASAALS ISDAPFNGPI GGARVGFING EYVLNPSIEE LKSSDLDLVV
AGTKSAVLMV ESEAAELSED QMLGAVLYGH EQQQIVIDNI AELAKAVGTQ KQDFVAPELN
AELKEKVTTQ FGEQVAEAYA ISDKQARYEK LDEIKAAAID ALAGDPESEE FAEKEAQIKE
IYNDLKYRTV RDAILSGKPR IDGRDLDTVR ALDIQVGVLP YTHGSALFTR GETQALVTTT
LGNSRDVNLI DSLAGTIQDH FMLHYNFPHY SVGETGREGV PKRREIGHGR LARRGVQAML
PDSDRFPYVI RVVSEITESN GSSSMASVCG ASLALMDAGV PLKAPVAGIA MGLVKEGDRF
AVLSDILGDE DHLGDMDFKV AGTKDGITAL QMDIKIEGIT SDIMEKALEQ AHAGRIHILN
AMNEVLPASR TEINAHAPNY AVIEINSDKI RDVIGKGGAT IRQLTEDTGA VIDIDDNGTI
RIFGENKAAT KEAIRQIEAI TAEVEVGKVY KGTVARVVDF GAFVTVLPGT DGLVHISQIA
DERVESVSDY LSEGQQINVL VQDVDNRGRI KLTMKGVEQE QTQA