Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0157 |
Symbol | infB |
ID | 5205921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 186097 |
End bp | 188814 |
Gene Length | 2718 bp |
Protein Length | 905 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598369 |
Product | translation initiation factor IF-2 |
Protein accession | YP_001279066 |
Protein GI | 148651973 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATA AGACCGTCAA AGAATTAGCA GACATGGTAA GCAAGACAGT CAGTGCAGTA CAAAAGCAAC TGACTGATGC TGGGCTGCCT GCTCGTGGCG AGGATGACCT GGTCACCGAG CTTGAGCAAG AACAGTTAGT AGCATTCTTA AAACAATCGC ACGGACAAAA AGAGAAGCGT CGTATTAGCC TAAAATCTAA AACGACCAGC ACCGCTCGTG TGACTGGCTC CTCGGGCAAG TCAAAAAGCG TCAATGTAGA AGTGCGTAAG AAAAAAGTAT TTGAAAAGCC AGATCCTAAT AAACTGGCTG AAGAAATTGC AGCGCGTGAA CAAGCGGCTT TAGAGGCCAA AAAACGCGCC GAAGAAGAAG CCAAAAAGCG TGAGCAGGTC AAAAAAGAAG CTGAAGAACG TCAAGCAGCA ACTTTGGCAG CCATGCGTGC CAACTTAGGT GGCGGCTCCT CTTCAAGCGA TAAAAAAGAA GAGTTATCTA CTGTCGTGGT GAAAAAAGGC AGTAAAGCTG CTGCTGCGGC AAAAGAAGCG CCTAAGAAGA AAGTGGCTCA GACCAAACCT AAAGTAGAAA CGGCCGCTGA GCGTAAAGCC CGCGAAACCC GTGAAGCAGA AGAAGAACGT CTACGTCAAA TTGAAGCAGA AACCCGTCGA AAGCAAGCCG AAGAAGCTCA GAAGAAAACC CTTGAGCAGA TGCGCAAAAT GGCTGGCAAA TACAGCGACA AAGATCCCGT GGCAGAAGTT CGTAAGGATG AGCCATTGGC CGAAGGTCTG GTGGGTGAAG CGTTAGAAGA GTCTTTTGAA AAAGAGCGTC GTGAAATTAA ACGTGGATCT GCCAGCACTG CCACTCGTGG CCGTCGCCGT AAAGGTCAAG AAGAGCGTGA AATTCGCAAC CGTAAGCATG GTCTAAAATC AAGCCAAGCC TCTCAGCATA AGTTTGAGAA GCCGGTTGAG AAGATTGTGC ATGATGTAGA AATTGGCGAG CAAATCGTTG TTTCAGACTT AGCGCAGCGC ATGGCGGTGA AAGCCCGTGA AGTGACTAAG CTGCTGATGA AGATGGGCGA GATTGTCAGT GCTGACCAAG AGATTGATCA GGCTACGGCC AGCTTAATCG TTGAAGAAAT GGGTCACAAC CCAATTCCAG TAAGTGATAC CAAGGTTGAA GACGACTTAC AAGAAGCGGT AGAAGAGCGC CGCAGTAATG TTCAGACACG TCCGCCAGTG GTTACCATTA TGGGTCACGT TGACCATGGT AAAACCTCAC TGCTTGATAA AATCCGTGAA ACCAAAGTAG CAACGGGTGA AGCCGGTGGT ATTACCCAGC ATATCGGTGC TTATCACGTT GAGACCGATC GCGGCGTTAT TACTTTCTTA GACACCCCAG GTCACGCAGC GTTTACCGCC ATGCGTTCAC GTGGTGCTCA AGCGACGGAT ATCGTTATTT TGGTAGTAGC TGCTGATGAC GGTATGATGC CGCAAACTGA AGAAGCTATT GACCATGCTC GTGCTTCAGG TACACCGCTA ATTGTTGCTA TTAACAAGAT GGATAAGAGC ACTGCAGATC CAGATCGCGT ATTAAATGAG TTAACCACCA AAGAAGTGGT TACTGAAGCG TGGGGCGGTG ATGTGCCTAT GGCGAAAATC TCTGCTAAGA CCGGTGAAGG TATTGATGAG CTGTTAGAGC TGATTAACCT ACAAGCTGAG CTTATGGAGC TTGAAGCCCC AACAGACGGC GCCGCTCAAG GTGTGGTTAT TGAATCTCGT CTAGAAAAAG GCCGTGGTGC AGTTGCTTCT ATCTTAGTTA AGAAAGGAAC TCTAAACCAA GGTGACCTAG TACTTGCTGG TGAATTCTAC GGTAAAGTAC GTGCGATGAC TGATGAGACC GGCAAACGTG TCAAATCAGC GGGCCCTTCT ATTCCAGTAG AAATCTTAGG CCTACCAGAT ACACCTGCGG CAGGTAGTGA ATTCTTGGTA GTCTCTGATG AGAAAAAAGC ACGTGAAGTT GCTGAATTCC GAGCCACTCG TGAGCGTGAG CGTCAACTTG AGCGTCAAAA CAAAATGCGC CTTGAGAGTA TGTTTGAGCA GATGGGCCAA GATGACTTGT CATTCTTGAA CATCATCTTA AAAACAGACG TACGCGGTAC ACTAGAAGCG CTACTTGCGG CCTTAGAAGA TCTGTCAACT GATGAAGTTA AAGTTAAGGT TATCAGCTCA GGTGTTGGTC CGATTGCTGA GTCTGATGTG ACATTAGCTG AGTCAAGTGA AGCGGTATTA TTAGGCTTTA ACGTCCGTGC CGATAATGCG GCCAAGCGCA AAGCTGACGA AGCTGGTATC GATATTCGCT ACTACAGCGT TATCTATGGC CTAATCGATG ATGTTAAAGC GGCAATGAGT GGTATGTTGT CTCCAGAGCA TCGCGAAAAA ATCTTGGGTA TTGCTGAAGT ACGTGATGTA TTCCGCTCTA GTAAATTCGG TGCAGCTGCC GGTTGTATGG TGGTTGAAGG TACCATATAC CGTAACAAGT CTATCCGCGT ATTACGTGAT GACAAAGTGG CCTTTACCGG TCAATTGCAA TCATTACGTC GCTACAAAGA TGACGTGAAC GAAGTACGCT CTGGTATGGA GTGTGGTCTT GCGGTTCGCG GCTACGATGT AGAAGTCGGT GATAAGATCG AAGTATTCGA AATCCAAGAA ATTCAGCGCA CCATCTAA
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Protein sequence | MADKTVKELA DMVSKTVSAV QKQLTDAGLP ARGEDDLVTE LEQEQLVAFL KQSHGQKEKR RISLKSKTTS TARVTGSSGK SKSVNVEVRK KKVFEKPDPN KLAEEIAARE QAALEAKKRA EEEAKKREQV KKEAEERQAA TLAAMRANLG GGSSSSDKKE ELSTVVVKKG SKAAAAAKEA PKKKVAQTKP KVETAAERKA RETREAEEER LRQIEAETRR KQAEEAQKKT LEQMRKMAGK YSDKDPVAEV RKDEPLAEGL VGEALEESFE KERREIKRGS ASTATRGRRR KGQEEREIRN RKHGLKSSQA SQHKFEKPVE KIVHDVEIGE QIVVSDLAQR MAVKAREVTK LLMKMGEIVS ADQEIDQATA SLIVEEMGHN PIPVSDTKVE DDLQEAVEER RSNVQTRPPV VTIMGHVDHG KTSLLDKIRE TKVATGEAGG ITQHIGAYHV ETDRGVITFL DTPGHAAFTA MRSRGAQATD IVILVVAADD GMMPQTEEAI DHARASGTPL IVAINKMDKS TADPDRVLNE LTTKEVVTEA WGGDVPMAKI SAKTGEGIDE LLELINLQAE LMELEAPTDG AAQGVVIESR LEKGRGAVAS ILVKKGTLNQ GDLVLAGEFY GKVRAMTDET GKRVKSAGPS IPVEILGLPD TPAAGSEFLV VSDEKKAREV AEFRATRERE RQLERQNKMR LESMFEQMGQ DDLSFLNIIL KTDVRGTLEA LLAALEDLST DEVKVKVISS GVGPIAESDV TLAESSEAVL LGFNVRADNA AKRKADEAGI DIRYYSVIYG LIDDVKAAMS GMLSPEHREK ILGIAEVRDV FRSSKFGAAA GCMVVEGTIY RNKSIRVLRD DKVAFTGQLQ SLRRYKDDVN EVRSGMECGL AVRGYDVEVG DKIEVFEIQE IQRTI
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