| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0151 |
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| Symbol | |
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| ID | 5205393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 179959 |
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| End bp | 181221 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640598362 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001279061 |
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| Protein GI | 148651968 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGGC CCCCTTCGCT TAATCAACTA GCTGCCGCTC CCTCTGCGAC TCTAGCACAG
GCAGAGCATG GCGCGCATCA GCCTCATGAT TTACAGCAAG ATCCGGTAGT TCAGCTGGTA
CAGGATTTAT TGTGTCAGGC AGTAGATAAA GGCGCCTCTG ACCTACACTT TGAGCCCTAT
GAGCATACGT TTCGGGTACG CTTTCGTATC GATGGCGTCA TGCAGCAAGT GGCCACACCA
GCGCTTGAGC TGCAAGCTAA GATATGTGCC CGCCTAAAGA TTATGGCACA AATGGACATA
TCTGAGCGGC GTATGCCTCA AGATGGCCGT ATTAGGCTGC AACTAAATGG GATGCCGACA
CTACACTTTC GTGCCAATGC TCTACCCACT TTGTTCGGTG AAAAAATTGT GCTTCGGGTT
ATTAATCCAG CCGCCTCGAT TGCTGGTATT GATAGCCTCG GGCTTGAGCC TGAACAAAAA
CAGCAGTTTT TACAAGCGCT ACAGCAGCCG CAAGGTATCT TATTGATTAC CGGCCCCACA
GGCTCTGGCA AAACCTTATC GCTCTATACC GGTTTAGATA TTTTAAACAC GGTGGCCACC
AATATCTGCA CTGTAGAAGA TCCGGTTGAA ATTAATTTAA CAGGTATCAA TCAGGTCACC
GTCAATCCTA AAGTCGGACT GAGCTTTGCG GTGGCCTTAA AGTCATTTTT GCGCCAAGAC
CCCGATGTAT TAATGGTGGG TGAGATACGT GATTTTGAAA CCGCGGATAC TGCCATTAAA
GCGGCACAAA CTGGCCATTT GGTGCTCTCT ACCCTGCACA CCAACTCAGC TGCTGAGACC
TTAACTCGCC TGCATCATAT GGGCGTAGCT TACTTTAATA TTGCTACCGC CATTAGTCTG
GTAGTGGCGC AGCGTCTGGC AAGATGCTTG TGCCGCCACT GCAAAATCCC TTGTGTGGTT
CCTGAGGTAA GTCTCATTGA GATTGGCTTT AGCGCCGAAG AGTTGGCACA GCCTGAGCAT
ATCATCTATA AGGCGGTGGG CTGTGATAAG TGCTGTGAGG GTTACAAAGG GCGCATCGGT
GTGTTTGAGG TGATGCCCAT GAACACGGCG CTTGCACAAG TGATTATGCA AGGTGCTAAT
GCCATTGAGA TAAAAGCGGC TGCCACCGAG CAAGGCTTTT TTGACTTAAG GCGGGCCGCT
ATTTTGAAAG TGCTTCAAGG CATCCTTAGC ATTGAAGAAA TGACCCGCAT GACGGCCCAG
TAA
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| Protein sequence | MSRPPSLNQL AAAPSATLAQ AEHGAHQPHD LQQDPVVQLV QDLLCQAVDK GASDLHFEPY
EHTFRVRFRI DGVMQQVATP ALELQAKICA RLKIMAQMDI SERRMPQDGR IRLQLNGMPT
LHFRANALPT LFGEKIVLRV INPAASIAGI DSLGLEPEQK QQFLQALQQP QGILLITGPT
GSGKTLSLYT GLDILNTVAT NICTVEDPVE INLTGINQVT VNPKVGLSFA VALKSFLRQD
PDVLMVGEIR DFETADTAIK AAQTGHLVLS TLHTNSAAET LTRLHHMGVA YFNIATAISL
VVAQRLARCL CRHCKIPCVV PEVSLIEIGF SAEELAQPEH IIYKAVGCDK CCEGYKGRIG
VFEVMPMNTA LAQVIMQGAN AIEIKAAATE QGFFDLRRAA ILKVLQGILS IEEMTRMTAQ
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