| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0141 |
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| Symbol | |
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| ID | 5204548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 169445 |
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| End bp | 170551 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640598352 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001279051 |
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| Protein GI | 148651958 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TCAAGCTACG CATCAAAGAC AAACACGTAA ACCAGCTAAA CAAACTAGCT
GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC
ACAGGTAAGT ACTTTTCGGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGAGAGTAT
TTAGGATTGC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTCACGCCAA ATCTCGTAAG
CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGCAAAAGC
CTAGGCTGGA TACCCTTTAA AAAGTCTGCT ATCAAATACC TAAGTACAAG ACAAACAGGT
AAAAAAGCAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCGAAA GGTAATCATA
GACGTATTCG ATAGCTACAA TTTGTCTTTG TATCAAATCA ATACGCTTGA GATAGTGCAA
GACAGCCGTA ACCGTTGGTA TGCCTGTATT ACCGTCAAAG ATTTTCCTAG ACAAGCAAGT
GGCAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGCAGT CTGCTACCAC ATCAAACGGT
GACAAGCTGA CAACCAAACA AACGCAAAAG TGGGCTAAAA AGCTTGCAAT AGCTCAAAGA
GCGAAAAACA AACAGCGAGT CAAAGCAATC CATGCCAAGA TCAAAAACTC AAGATTAGAT
GCCATACACA AATTCACCAC CCAATTAGTT AAGGATAATG CCTTAATTGT GGTTGGTGAT
GTTAAATCAC GCTCATTCAC CAATTCGATG ACCAACCTAG CTAAATCGAC ATACGATGCA
GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT
GAGATAGTGA ATGAGAGTTA CACTACCCAA ACCTGTTCGC ACTGTCGCAA AATAAGCGAT
AGTAGTCCGA GCGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCCGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT
CTAGCTGTAG CAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHVNQLNKLA GSVNYAWNYV NALSFEHLRR TGKYFSAYDL SQYTKGSGEY
LGLHSQTLQA INETHAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLSTRQTG
KKALKSTIQL SLCKGRKVII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPRQAS
GKGSVGIDLG LKQSATTSNG DKLTTKQTQK WAKKLAIAQR AKNKQRVKAI HAKIKNSRLD
AIHKFTTQLV KDNALIVVGD VKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL
EIVNESYTTQ TCSHCRKISD SSPSGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR
LAVAIPSV
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