| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0139 |
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| Symbol | |
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| ID | 5204546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 168080 |
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| End bp | 169018 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640598350 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_001279049 |
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| Protein GI | 148651956 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGTG ATCGCGCCAT ACAACCCAGA CAGCCCAAAG CCCTTGCGGT GGATGATGAG
CCCGCTTATA TCACCGAGTT TCGTCAGGCG ATGCTAGCAC GTGGTCTGTC TACGCGCACT
CGTAATGCCT ATGTGCGTGA TTTAAAGCTG TGCGAGACCA CCCATTCTAA AGCGCTAACG
CTGTGGTCAG ACATGGATGT GATGCAGTGT TTAACGGCGC TAGATAGACA AGGAAAAACG
CCACGCACCC AAGCGCGTAT GCTCTCAAGC TTGCGTCAGT TCTACTTATG GATGGTGGGC
AATGAGCGCC GTGAAGACAA CCCATGCGAG CGTATCAAAA CACCCAAGAT TGGCCGATCT
TTGCCCAAGG ATTTGTCCGA AAACGATGTC GAAAGCCTGC TGTCTGCCCC CGATACCAGT
ACCGCCCTTG GTCTGCGTGA TAAGGCCATG CTTGAGGTGC TCTATGCTTG CGGGCTTCGG
GTCAGTGAGC TGATGAACTT ATCTTTAGAG CAGGTCAATT TAAATGCCGG CTGGCTACAA
ATCACCGGTA AAGGCAATAA AACCCGCTTG GTGCCTTTGG GTGAGTATGC CAGTGACGCC
TTGGATGATT ATTTGACTCA TGCCCGAGGC GAGCTGGTGG CACATTTAAA ATCAGGTAAC
TGCCAAGCAG TGTTTTTGAC CACCCAAGGC GGCTATATGA CCCGCCAGAA CTTTTGGTAC
ATGATAAAAA AATATGCCAA ACAAGCAGGC ATCCAAAGCG ACTTATCTCC GCATACCTTG
CGGCACGCTT TTGCCACGCA TTTACTTAAT CACGGTGCTG ACTTACGTAG CGTACAGCTG
CTACTGGGCC ACAGTGACTT ATCTACCACT CAGATTTATA CCCATGTGGC CACGGCTCGA
TTGCAGCAGC TTCATGAAGC GCATCATCCC AGAGGCTAG
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| Protein sequence | MSRDRAIQPR QPKALAVDDE PAYITEFRQA MLARGLSTRT RNAYVRDLKL CETTHSKALT
LWSDMDVMQC LTALDRQGKT PRTQARMLSS LRQFYLWMVG NERREDNPCE RIKTPKIGRS
LPKDLSENDV ESLLSAPDTS TALGLRDKAM LEVLYACGLR VSELMNLSLE QVNLNAGWLQ
ITGKGNKTRL VPLGEYASDA LDDYLTHARG ELVAHLKSGN CQAVFLTTQG GYMTRQNFWY
MIKKYAKQAG IQSDLSPHTL RHAFATHLLN HGADLRSVQL LLGHSDLSTT QIYTHVATAR
LQQLHEAHHP RG
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