| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0135 |
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| Symbol | |
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| ID | 5206747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 162117 |
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| End bp | 163826 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640598346 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_001279045 |
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| Protein GI | 148651952 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATA CCCAACCTGC TCCTCACTTA CGCTCTATAG TTAACGCCGC CGTCAAGATA
TTACCGCAGC ATCAGTCCAC CTTGCAGCTA CTTAGAGTAC CGGCAGTGCT TGATGTGCCT
TTCTCAAAGT TTGTGCTCGA TAGCCGTCAG TTGGCAAAGC GTGACGCGTC ATCCGCGCCG
GCAGCCTTTG TGTTATTAAA AAGTCAGACT CAGCCTTTGC AAAAAAGCCA GCAGTATGTC
CAAACCGCCT TACCGCAAGC GGCATTTATC ATTAGTGAGA TTGACCCACA GCAGTTAGGC
TTAGAGGGAT TAGATAAACC AAGCGACTCA AGTCCAGACT GTCCTATTTT ATTTGTGCCC
GATATCCGTG ATGTACTGGG TACTTTGATT CAGTTGAGTC TTTTGTCTGA TGATGCGCTC
TCACAGATCG GTGATGCACA GTCTTTGGCA CAAACACTGC CGCAAGTTAT CGCTGTAACC
GGCACCAATG GCAAAACCAC CATTAGTCAG TTAATGGCTC AGTTGTGTCA GTTTTCAGAG
GTCGCTCAAT TACAAAACAG TGCAGTGATG GGTACCGCGG GTAACGGTCG TCTAGACAGT
CTCGTACAGG CCAGCCATAC CACAGGCGAT GCGCTAGCGG TACAAGGCTT CTTACGTAAG
ATGGGTGATG AAGGGGTGGA TTTATTAGCC CTAGAGGCCA GCTCACATGG TCTCGATCAG
CAGCGCTTGC AAGGCGTACC AGTCACGGTG GCACTGTATA CCAACTTAAG CCGTGACCAT
TTAGACTATC ACCCAGATAT GCAAGATTAT GCCCAAGCCA AGGCACGCTT ATTTGATAAA
GCTTATTTTC CACAGTTAAC ACATGCTGTG ATTAATGCAG ATGATGAGTT TGCGCCGCTG
ATGATTGAGA CAGCGCAAAA CTCAGGGGTT AGTGTCTGGT TGTACAGCTT ACAGGGCGAT
TTTATCGAAA AAAGCGATCT GCAACGTAAT GCCTACTTTA TCGCCAAAAC CATTGAGCCA
AGCTTAGATG GGGTGAAAAT TGAGGCCGCA ACCAGCTTTG GGCCATTGAC GTTGCACAGC
CCCTTATTAG GCCGCTTTAA CGTGGCCAAC CTATTGGCAG CTGTCGCCGG AGCGATCGCG
TTAGGTATCG AGCCTGAGAG CATCCCCGCC TTAGTCAAAC AGCTGCATGG TGCCAGTGGC
CGTATGCAGC GTGTGAGCTT AGATGAGCAA GGCTCACAGC CTGAGCAAGG GGTGTTTATT
GTCGATTATG CGCACACGCC GGATGCGTTA ACCCAAGTGC TGACCAGTTT AAAATCGCAT
TGCAGCGGTA ACTTATGGGC CATCTTTGGC TGCGGCGGTG ACCGTGATAA GGGTAAGCGC
CCTCTCATGG CGCAGGCGGG CTTGGCCACT GCCGATAAAG TGGTATTAAC CTCTGACAAT
CCGCGCAGTG AAGATCCGCA AATGATCTTG CAGGACATGC AGCAAGGGAT GAGTGACGAG
CAGCATGCCA AAACCACAGT CATTGCCGAT CGAAAACAGG CCATCGAGTA TGCCGTAGAG
CACGCTGCCG CAGATGATAT CGTGGTCATT GCTGGTAAAG GGCATGAGAC TTATCAAGAA
ATCAAAGGCG TGCGTTATGA CTTCGATGAC CGCTTAGTGC TACAGCAGGC ATTAATTGCG
GCGCACAGTT CAGAGGCCTC AAGCCGCTAA
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| Protein sequence | MTHTQPAPHL RSIVNAAVKI LPQHQSTLQL LRVPAVLDVP FSKFVLDSRQ LAKRDASSAP
AAFVLLKSQT QPLQKSQQYV QTALPQAAFI ISEIDPQQLG LEGLDKPSDS SPDCPILFVP
DIRDVLGTLI QLSLLSDDAL SQIGDAQSLA QTLPQVIAVT GTNGKTTISQ LMAQLCQFSE
VAQLQNSAVM GTAGNGRLDS LVQASHTTGD ALAVQGFLRK MGDEGVDLLA LEASSHGLDQ
QRLQGVPVTV ALYTNLSRDH LDYHPDMQDY AQAKARLFDK AYFPQLTHAV INADDEFAPL
MIETAQNSGV SVWLYSLQGD FIEKSDLQRN AYFIAKTIEP SLDGVKIEAA TSFGPLTLHS
PLLGRFNVAN LLAAVAGAIA LGIEPESIPA LVKQLHGASG RMQRVSLDEQ GSQPEQGVFI
VDYAHTPDAL TQVLTSLKSH CSGNLWAIFG CGGDRDKGKR PLMAQAGLAT ADKVVLTSDN
PRSEDPQMIL QDMQQGMSDE QHAKTTVIAD RKQAIEYAVE HAAADDIVVI AGKGHETYQE
IKGVRYDFDD RLVLQQALIA AHSSEASSR
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