Gene PsycPRwf_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0131 
SymbolgltX 
ID5204558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp156290 
End bp157807 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content48% 
IMG OID640598342 
Productglutamyl-tRNA synthetase 
Protein accessionYP_001279041 
Protein GI148651948 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0539841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAA CCACTGCCCA GCGCCCAGTC CGCACCCGTA TCGCCCCCTC ACCCACCGGC 
TTTCCTCATG TAGGCACTGC CTACATCGCC CTATTTAACC TAGCCTTTGC CAAAGCACAT
GGCGGTGAAT TCATCCTACG TATTGAGGAT ACCGATCAAA GCCGCTCAAC TGAGCAATCA
GAGCAAATGA TTTTAGATGC CTTACGCTGG GTCGGTCTAG ACTGGGCGGA GGGTCCTGAC
AATGGTGGTC CGCATGCCCC ATACCGTCAA AGCGAGCGCA GTGAAATTTA TAAACAATAT
GCTCAAGAGT TGTTGGACAA AGGTCATGCT TTTCGCTGCT TCTGCACCCC TGAGGAGTTA
GATGCCATGC GTGCCGAACA AATCGCGCGT GGTGAAAACC CTCATTATGA CGGCCGCTAT
GCCAACTTAC CTCGAGAAGA GTCTGACAAA ATGGCTGCCG AGGGTAAGCC ATTCGTTATT
CGGATGAAAG TGCCCACCGA AGGCGTGTGT AAAGTACAAG ACATGCTACG CGGCGAAGTG
GAAATTCCTT GGGAACAAGT GGACATGCAA GTGCTGTTAA AAACAGACGG CCTACCCACA
TATCACCTAG CCAACGTGGT GGATGATCAC TTAATGGAGA TCACTCACGT TATCCGCGGT
GAAGAGTGGC TAAACTCAGC GCCTAAGCAT CAGCTATTAT ATGATTACTT CGGTTGGGAG
ATGCCTGTGC TGTGCCACAT GCCACTGCTG CGTAACCCAG ATAAATCAAA GCTGTCTAAG
CGTAAAAACC CAACGTCTAT TACCTATTAT CGTGATGCCG GCGTGTTGCC AGAAGCGCTA
CTAAACTACT TAGGTCGTAT GGGTTACTCA ATGCCTGATG ACAAAGAAAT CTTCACCCTT
GATGAGATGA TTGAAAGCTT TGACATCACG CGTGTGTCGT TAGGTGGCCC TATCTTTGAT
CTTGAAAAGC TACATTGGTT AAATGGTGAA TGGCTACGTG CGCTAACCCC AGAGCAGTTA
AAAAATAAGA TTTTGGACTG GGCAAATGAT TCAGACAAAT TAACCGCCAT TGCAGCGGCG
ATTCAGCCCC GTATTCATCT GTTGTCTGAT GCCGTGAACT GGGGTGGCTT TTATTTCCAA
AATCTGCCAA GCATTACCGC TGAGAGCTTC GAGCACAAAA CGCTCACACC TGAGCAAATC
ATGGAAATCC TGCAGATTGC CACTTGGAAA CTTGAAGCAT TACCTGAGTG GAGCGAAGAC
AATATCTTTA AAACACTTAA AGGCTTAAGC GCTGCGCTCG ATATCAAGCT GCGTGACATG
ATGGCGCCGT TCTTTATTGC CATTGCTGGC AGCACCTCAT CGACGCCTGT GATGAACTCT
ATGTATGTGA TTGGCGCTGA TATGACCTTA ACTCGCCTGC GTCATGCCGT TGAAGTCTTG
GGCGGTATTG GCAAGAAAAA GCTGAAAAAG CTTGAGAAAA CTGCAGCGGA TATGCCAGAC
TTTTTGGCAG CTGAGTAA
 
Protein sequence
MTQTTAQRPV RTRIAPSPTG FPHVGTAYIA LFNLAFAKAH GGEFILRIED TDQSRSTEQS 
EQMILDALRW VGLDWAEGPD NGGPHAPYRQ SERSEIYKQY AQELLDKGHA FRCFCTPEEL
DAMRAEQIAR GENPHYDGRY ANLPREESDK MAAEGKPFVI RMKVPTEGVC KVQDMLRGEV
EIPWEQVDMQ VLLKTDGLPT YHLANVVDDH LMEITHVIRG EEWLNSAPKH QLLYDYFGWE
MPVLCHMPLL RNPDKSKLSK RKNPTSITYY RDAGVLPEAL LNYLGRMGYS MPDDKEIFTL
DEMIESFDIT RVSLGGPIFD LEKLHWLNGE WLRALTPEQL KNKILDWAND SDKLTAIAAA
IQPRIHLLSD AVNWGGFYFQ NLPSITAESF EHKTLTPEQI MEILQIATWK LEALPEWSED
NIFKTLKGLS AALDIKLRDM MAPFFIAIAG STSSTPVMNS MYVIGADMTL TRLRHAVEVL
GGIGKKKLKK LEKTAADMPD FLAAE