| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0118 |
|---|
| Symbol | |
|---|
| ID | 5205507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 141266 |
|---|
| End bp | 142369 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640598327 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001279028 |
|---|
| Protein GI | 148651935 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATTA AACGTTTAAA ACAAATCGCC AAGCGCGAGG CTGAGCATCT ATTCACAGTT
AGGCCAAGTG CCAAGCCTTG GCATGTCAGC CTCTCTGCAG CACTGATTAT TGCCTCTACC
ATTCTTATTG GTGCTTTATG CAATAACTTG CCAATGGGTA TCTTGGCGTC ATTGGGCGCT
ATGATTATCC TAAACCAGCC CGTTGCAGGG AGTTTGCGCC AACGCCAAGG CTTGCTATTG
CTCATGGGCA TTATCATGGT GCTAAGCTTT AGTGTAGGCC TCATAGCGCA TCAGGTTCAG
TTATTAAAAT GGCCTTTATT CACGCTACTT TGTTTTATCG TGGTGGCCAT AGGTCGCTAC
ATGCATCTGC CTCCGCCGGG TAGTATGTTT GTGCTGATGG CATCTGTCAT CGCCATATTT
ATGCCTGGGG GATGGGAGGA TATGCCAGGT AGGATAAGCG TGGTAGCCGC CGGTGCGCTA
TATGCTTGGG TCATGTCTTT GTTTTATAAC TTAGCGGTGG TGGGGGTGGC ATCTGAGCCT
GCGCCCTCTA AGCACTACTA TGAGCTTGGG CTAATTACTG AAAGCTTAAT CGTCTGTTTT
TTTGTGGTGT TGTCGCTTGA ATTGGCGCTG TGGCTAGATA TGCCTTATCC TTATTGGGTG
CCTGTAAGCT GTTATATTAT CATGCAGGGC ATGCAGTTAC GTACGATGTG GATCAGGCAA
CTGCACCGTG TTTTAGGGAC GGGCATTGGG GTGTTTGTCG CCGCATTTTT ATTGTCGTTT
TCATGGAGCA ATGTAGGGGT GGCGTTGGTG ATTTTTTGCC TACTATTGTG GATAGAGACG
TTGGTGTCTC GCCATTATGC TTCGGCAGTT ATTATGATCA CCCCTTTGAC GATATTTATT
GCGGAATATG GTAAGAGCGC CGCCCATACC GAAGTAGGGG CAATGGCTTA TCAAGGGATA
ATGCAAGCGC GGTTTTTGGA TACTTTATTG GGTTGTGTGG TCGCTTTATT AGGCGGTGTG
GTTATGCAGT CAACTTGGCT AAGGCGACCG CTGATGACAC TTGAGGCCAA AGTTTTTCAA
GACAAAATCC GACTGCAAAA ATAG
|
|---|
| Protein sequence | MSIKRLKQIA KREAEHLFTV RPSAKPWHVS LSAALIIAST ILIGALCNNL PMGILASLGA
MIILNQPVAG SLRQRQGLLL LMGIIMVLSF SVGLIAHQVQ LLKWPLFTLL CFIVVAIGRY
MHLPPPGSMF VLMASVIAIF MPGGWEDMPG RISVVAAGAL YAWVMSLFYN LAVVGVASEP
APSKHYYELG LITESLIVCF FVVLSLELAL WLDMPYPYWV PVSCYIIMQG MQLRTMWIRQ
LHRVLGTGIG VFVAAFLLSF SWSNVGVALV IFCLLLWIET LVSRHYASAV IMITPLTIFI
AEYGKSAAHT EVGAMAYQGI MQARFLDTLL GCVVALLGGV VMQSTWLRRP LMTLEAKVFQ
DKIRLQK
|
|---|
| |