Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0110 |
Symbol | |
ID | 5205083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 131560 |
End bp | 132525 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640598319 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_001279020 |
Protein GI | 148651927 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00667649 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGG TTTTTTTAGA CAGAGGCACT TTTTTGGAAG GATTGGCGCT GCCAAAACCT CAAGGTATTG ATGAATATCA AACCTTTGAT GAGACGCCCC AAGACGATCA GTTAATCATC GAGCGCTGCC AAGGGGCGCA GATTATCTTT ACCAATAAGG TAAAAATTAG CGCTGAGGTT ATCGCCGCTT TGCCGGACCT AAAGCTCATT CAATTAACGG CCACTGGCAT GAACAATGTG GATGCTGACG CCTGTAAAAA ACAGGGTGTT GAGCTATACA ATGTCGCCGG TTATGCCGTA AAAAGCGTGC CAGAACATAC CTTTATGTTA ATGTTGGCGG CACTGCGCTC CGGCGTCCAT TATCACAACA AAGTCATCGA TGGCAGCTGG GAGGCCTCAG GCAACTTCAG CCTGATGGAT GTGCCATTAA TTGACTTAGA GGATACCACC TTGGGCATTA TCGGTGTCGG CACCATTGGC AAACGAGTCA CCGAAATTGC CAAAGCCTTT GGCATGACTG TGCTTTGGGC CGAGCATCAA GGTCAAGCGC CGCGCAATGA TGAGTATACC GACTTTGACA CTGTGCTCGA GACCTCTGAT GTGATTAGCC TGCACTGTCC ATTGACCGAA AAAACAGCGC ACCTCATTAA CGCTGATACT TTGGCCAAAA TGAGCAAAAA ACCCTTGGTG GTGAACGTGG CACGCGGCGG AATTGTAGAC TCAAAAGCCA TAGTTGAAGC GCTAGAGCAA GGTCAAGTAC TGGGCTACGC CACTGATGTG TTTGAACAAG AGCCGACCAC TCAGGAGGAT CCATTATGGC AATTGGGGCA AAAAAATCAT CCACGCCTGA TTTTTAGTCC GCACAATGCT TGGGCCAGTA AGGCTGCGCA GCAAAAGCTG TGGGATATTT TAACCGAACA GGTCAGTGAG TTTATTACCA CACACAAACA CTCAGTGTCA TCCTAG
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Protein sequence | MKAVFLDRGT FLEGLALPKP QGIDEYQTFD ETPQDDQLII ERCQGAQIIF TNKVKISAEV IAALPDLKLI QLTATGMNNV DADACKKQGV ELYNVAGYAV KSVPEHTFML MLAALRSGVH YHNKVIDGSW EASGNFSLMD VPLIDLEDTT LGIIGVGTIG KRVTEIAKAF GMTVLWAEHQ GQAPRNDEYT DFDTVLETSD VISLHCPLTE KTAHLINADT LAKMSKKPLV VNVARGGIVD SKAIVEALEQ GQVLGYATDV FEQEPTTQED PLWQLGQKNH PRLIFSPHNA WASKAAQQKL WDILTEQVSE FITTHKHSVS S
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