| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0108 |
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| Symbol | |
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| ID | 5205081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 128077 |
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| End bp | 129987 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640598317 |
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| Product | ABC transporter related |
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| Protein accession | YP_001279018 |
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| Protein GI | 148651925 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.366198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TCTTTCACTA TTTTGAAACC CGTCTTTCAG CTTTCCCAGA GAACAAGATC
CCGCTACCCA AAGAGGGACT GTTTAAGTTT TTGTGGGCCT GTACCTATGG TCTGCGTGGC
TGGCTGCTGT TATTTATGAT TCTCACAGCC GGTATCGGTA TGTACGAGGC CATGCTGTTT
GCGTGGATTG GCAATCTGGT CGACTGGCTT GGGATGTATA CCCCCTCTAG TCTGTGGGCA
GAAAAAAGCG GCGCATTAAA GCTGATGGCT GTGGTGCTGA TTATCAGTCC ATTTTGGGTC
GGCTTTGCCG CTTTGGTTCA CTTCCAAGTT ATCCAAGGCG TGTTCCCGAT GCAGATGCGG
TGGCGCTTTC ATAAGCGTAT GCTGGGTCAG TCGATGCAGT TTTACCAAAA TGAATTCTCA
GGACGCGTCT CTGCTAAAGT GATGCAGACA GCGCTTGCGG TGCGCGATAC CGTGATAACT
GTGGTAGATA TGATGATTTA TGTGCTGGTG TATTTCGTCA CCAGTGGCAT TATTTTATTC
AAGCTCGATA GTCTACTGCT TATCCCCTTT GCGCTATGGT TGGTGTTGTT TGGGTTTACG
CTTTGGTATT TTTTGCCCAA ATTAAAGCAA ACAGCCAGCA TTCAGGCCGA TGCACGCGCC
CTGATGACTG GGCGCATTAC CGATGCTTAT GCCAACATTA TGACTGTCAA GCTATTTAGC
CACTCTCAGC GTGAGCTAAG TTATGCCAAA TCAGCGATGA AGCAGTTTTT GGCCACAGTA
CATGGTCAGA TGCGCTGGGT GACGGCGCTG GAATTTGTGA ACCATCTCAT TAGCGTCATC
TTAATTGGCA GTACCGCCGC CATTGGTCTG CACTTATGGC AGCGTGGTGA TGTGGGTGTG
GGCGCTATTG CCGCAGCTAC CGCTATGGCA CTGCGCTTAA ATGGCTTAAC CCACTGGATT
ATGTGGCAAA TGGCCAGCTT GTTTGAAAGC GTGGGTACGG TGCAAGATGG TATTCGCACG
TTGTCTGCAC CGCAAAGCGT GGTGGACAAG CCCGGTGCTC CGGATATGGT GGTCCGTGAG
GGTCATATTA AGTTTAAAAA CGTCGACTTC GGCTATGAAG GCAGCGACCT GAGTATCGCC
ACAGAAGACA GCAAGCCTGA AGCATCAACC AAGCACAAAA ACTACATTAA GCTGCTCGAT
AACTTTAATC TGGATATCAA ACCTGGTGAA AAGATTGGCT TAGTGGGGCG TTCAGGGGCG
GGTAAATCGA CCTTGGTTAA TTTGCTACTG CGCTTTTATG ATGTCGATGG CGGACATATT
ATTATTGATG GTCAAGCCAT TGATGCGGTG ACGCAAGAGA GTCTGCGCCA ACAGATTGGT
ATGGTCACTC AAGACACCTC GCTTTTGCAC CGTACAGTGC GTGAGAACAT TGCTTATGGC
CGCCCGACTG CCACAGACGC TGAGATTATC GCGGCATGTA AGCAGGCACA GGCTTGGGAC
TTCATCCAAG GCTTGCACGA TGCCAAAGGC AATACCGGGC TTGATACACA GGTTGGTGAG
CGTGGGGTTA AGCTATCAGG GGGGCAACGT CAGCGTATCG CTATTGCCCG AGTTATGCTA
AAAAATGCGC CCATTTTATT GTTAGATGAG GCCACCAGTG CGCTCGATTC AGAAGTTGAG
CACGCCATCA CCGAAAGCTT AAACAGCATG ATGATGGGCA AAACTGTGAT CGCCATTGCC
CACCGTCTAT CGACCATTGC CGCGTTAGAT CGCTTAGTGG TCATGGACAA AGGCTGCATT
ATTGAGCAAG GCAGTCACGA AGAGTTGTTG GCGAAAAACG GTGTTTATGC CAGTCTGTGG
CAAAGACAAA GTGGCGGCTT CTTAGGCGAT GATGAGGACA TAGCGACGTA A
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| Protein sequence | MKKLFHYFET RLSAFPENKI PLPKEGLFKF LWACTYGLRG WLLLFMILTA GIGMYEAMLF
AWIGNLVDWL GMYTPSSLWA EKSGALKLMA VVLIISPFWV GFAALVHFQV IQGVFPMQMR
WRFHKRMLGQ SMQFYQNEFS GRVSAKVMQT ALAVRDTVIT VVDMMIYVLV YFVTSGIILF
KLDSLLLIPF ALWLVLFGFT LWYFLPKLKQ TASIQADARA LMTGRITDAY ANIMTVKLFS
HSQRELSYAK SAMKQFLATV HGQMRWVTAL EFVNHLISVI LIGSTAAIGL HLWQRGDVGV
GAIAAATAMA LRLNGLTHWI MWQMASLFES VGTVQDGIRT LSAPQSVVDK PGAPDMVVRE
GHIKFKNVDF GYEGSDLSIA TEDSKPEAST KHKNYIKLLD NFNLDIKPGE KIGLVGRSGA
GKSTLVNLLL RFYDVDGGHI IIDGQAIDAV TQESLRQQIG MVTQDTSLLH RTVRENIAYG
RPTATDAEII AACKQAQAWD FIQGLHDAKG NTGLDTQVGE RGVKLSGGQR QRIAIARVML
KNAPILLLDE ATSALDSEVE HAITESLNSM MMGKTVIAIA HRLSTIAALD RLVVMDKGCI
IEQGSHEELL AKNGVYASLW QRQSGGFLGD DEDIAT
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