Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0104 |
Symbol | |
ID | 5206176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 123847 |
End bp | 125037 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640598313 |
Product | hypothetical protein |
Protein accession | YP_001279014 |
Protein GI | 148651921 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000484074 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATATTGC GAGGTGAAAC ACAAGAAAAC GGAGAGCTGC CAACCTTATC GTTTTCGCGT ACCGATGGTA TTGCCTTAAC CAAGAATAAC CGCATCAAAG ACTTAAACAT TCAGGCCGAT GCCTCACACC GTGCTATTTA TAACATCTTG CAAGAACAAG ATTTGGGCAG CTTTCAATTT GAAAATCTAA GCCTAGTCGG GCAATTGTCA TTCATCACCC GTCCAGGTAC TAAGTCGGCC AAGGTCAGCA TTAAAGATGT AGACATTATC GCCTGTGATG CGCGCCATTA CCCAGAGCAG CCGCAAAAGT ACGGCGTCAA TGTGCTTCAA GGTGCGCTGA CTGTGTATAA CTTTAATAGC GAAAAAGACA GTCGGATTGA TTTAACGATA GACAATATTA CGATTGGTCG TAAAAATGCC CCTGTATTAG GCTCAGGCTT ATTTGTTTCA GGCTTTGGTG ATGAGGGTGG TACGGTTGTG GCTGATCGCA TTACCACCGG TGCGGTGTAT TCAAATGGTA AATTGCCGTT TGGCGTACCC GATATCATTA CTGCCGCAAT CTTTATTGTC TATGGCGCCA CTGTCAAACA GCTCACCCAT AATGAGACCA TCGTGACTTA TGGCGTTAGC GATATGGTGT TAGATACTTG GGGACATGTG GATAACTGGC TGTCAGAAAA AGATGTTATC TCGTACGGCC CAAGCGGTAT AGGATTCGTA AACTTCGGTA CTGTGGGTAA CTTTGTGGTA AAAGGCGATG TGAAGACTTA TGGTCTAGGG GCACGTGGTT ATAACCAGTA TGATGGGACA GTGGATAATA TCGAATTTGG CAGCATCGAA ACCTTCGGCG ATGGCTCAAT TGGTATTCAG TTAAGCCGTA AAATTGGCAA GCTGACTGTG CACCGTGATG TGATTACCCA CGGTGGTGAA GGCCAGTCAT TGGTGAAAGG GGTATTATCT ACCCTAAAAG CCATTGGCTT ATCGGTTAAA GAGGGCGGAG AAGCTGAACA AATTAATATC GGTGGTAATT TAGAGACCCA AGGCAATGAG GTAAATACAG TAGAAGTTAA TAAAGGCGGT AAAATTCATG CCATACAAGT GGGCGGTGGG ATTGTTGCCA AAGGCGAGAA AAGCAAACGC CTAGATATCG AAGACGGTGC AGACGTACCT GAGTCTTTAA AAGAGGCTTA A
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Protein sequence | MILRGETQEN GELPTLSFSR TDGIALTKNN RIKDLNIQAD ASHRAIYNIL QEQDLGSFQF ENLSLVGQLS FITRPGTKSA KVSIKDVDII ACDARHYPEQ PQKYGVNVLQ GALTVYNFNS EKDSRIDLTI DNITIGRKNA PVLGSGLFVS GFGDEGGTVV ADRITTGAVY SNGKLPFGVP DIITAAIFIV YGATVKQLTH NETIVTYGVS DMVLDTWGHV DNWLSEKDVI SYGPSGIGFV NFGTVGNFVV KGDVKTYGLG ARGYNQYDGT VDNIEFGSIE TFGDGSIGIQ LSRKIGKLTV HRDVITHGGE GQSLVKGVLS TLKAIGLSVK EGGEAEQINI GGNLETQGNE VNTVEVNKGG KIHAIQVGGG IVAKGEKSKR LDIEDGADVP ESLKEA
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