Gene PsycPRwf_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0090 
Symbol 
ID5205791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp108859 
End bp110148 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content51% 
IMG OID640598299 
Productmajor facilitator transporter 
Protein accessionYP_001279000 
Protein GI148651907 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATT CTACCTCTGC CCAAAACAGT CTCAGCTCTA AGGCGACGAC GCCTAACGCC 
TCCCAGCCCG CCCATACTTT GGGTCAAAAG ACACCACCTG CGGTATTTTG GCTGGTGGTC
ATCGCCATAT TACTGATGGC GAGCAATATG CGCTCGCCCA TCGTGGCACT CGGTGCCATA
GCGCCTGTGG TCCAAGACGC ACTCAATATC AATGCCACCC ATATTGGCTG GCTGGGCGCT
ATTCCTATGC TAATGTTTGC ACTCGGCGCC TTAATCTCTC CGGCGATAGG CAAGCGCTTT
GGGCTTGAGA ATACCTTAAT TGCGGTGCTA TTCGTCATTA CTGCCGGTAT TATCATGCGC
TCAACTTGGG TCAGCTGGCA TGGCTTCTTG GTGGGTACGG TATTGCTGTC ATTGGCCATC
GGTTTTGCCA ACACCTTAGT GGCACCGGTT ATCAAGCAGC GAACCCCGCA CAATATTGCG
TTAGTGACCG GATTATTTAG CTTAACCATG TCGGTGATGG CAGGGATAGT CTCAGGACTG
GTCTATCCAT TGACTGAGCG GATCGGCTGG CAGTGGGCGC TGGGTGGTTG GGCAATATTG
GGTATTGCTG CCATTATTGC GTGGGTCATC TTACGCCTAA GGCTTGGATC CTCTCATAAG
CTGCCGGCAG CGGTAATGAA CTCAGAGCAG CAAGCGCAAG AGGACATCTG TATTTGGAAA
TCAGCACTGG CCTGGCAAAT GGCGGTGTTT ATGGGGCTAC AATCCTTGTT ATTTTATACC
GTGGCCGCTT TTTTACCCTC CATCTGGATC AGTAAAGGCT TAAGTGAGGT TGAGGGCGGT
AGCATGGGCT CGGTGTTCCA GTTTATGGCG CCCATTGCCA TTATCGGTAT GACGTGGCTA
ATTCGCCGCG GAATGCAAAT TCAGACTGTG GCCATTGCCG CCACGATACT CAATGTCATT
GGCCTAGTCG GTATTACCTA TCTATCACCT CACTTAGCTT GGCTGTGGAC CGCTATTATG
GGGCTTGGCT GTGCCAGTAT TTTTACCCTA TGTATCATGC TGTTCTCTTT ACGCACTTAT
AGCCCAAACC AAGCCAGTAA ACTGTCGGGG ATGGCTCAGA CCGTGGCTTA CTTGGTGGCT
TTCGCCGGTC CTTTTGGCGC AGGCTGGCTG CATGAAGCAA CTGGCGGCTG GGATGGCCCT
TTATTATTTA TATTGATACT GACCATCATT AACTTAATTA TCGCTTGGCT TGCCAGTCGT
CCTATTATGA TTGACGGCAA GCCCGCTTAA
 
Protein sequence
MSHSTSAQNS LSSKATTPNA SQPAHTLGQK TPPAVFWLVV IAILLMASNM RSPIVALGAI 
APVVQDALNI NATHIGWLGA IPMLMFALGA LISPAIGKRF GLENTLIAVL FVITAGIIMR
STWVSWHGFL VGTVLLSLAI GFANTLVAPV IKQRTPHNIA LVTGLFSLTM SVMAGIVSGL
VYPLTERIGW QWALGGWAIL GIAAIIAWVI LRLRLGSSHK LPAAVMNSEQ QAQEDICIWK
SALAWQMAVF MGLQSLLFYT VAAFLPSIWI SKGLSEVEGG SMGSVFQFMA PIAIIGMTWL
IRRGMQIQTV AIAATILNVI GLVGITYLSP HLAWLWTAIM GLGCASIFTL CIMLFSLRTY
SPNQASKLSG MAQTVAYLVA FAGPFGAGWL HEATGGWDGP LLFILILTII NLIIAWLASR
PIMIDGKPA