Gene PsycPRwf_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0084 
Symbol 
ID5204654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp102631 
End bp103830 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content49% 
IMG OID640598293 
Producthypothetical protein 
Protein accessionYP_001278994 
Protein GI148651901 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAC ACAAAACAAC GCCGCCATCA GACATTACTT CGTATTGTGG CAGCTATCTG 
CCAAGCGATG TGACTTTGTT ATTAGACATT GTTGATAAGT CGGGTGTTAG GGATGTACCG
GTGGCACAAA AAGAGGCGCT GATTCAAAGC GGACAGCAGC ATTACTCAGA CATGCTGACT
TTAGAAAAAG CGCCTTCTGA CGCCCATGAG CAGATGTATC AACAGGCGTT ACAGCAAGGA
AAGTTACGCT TGGCGCAGGA TATTATTCGG CTTAGCACCA CTTTAAAAAG CTTGTTTGAG
ACGCAGACAA ATAGCCGGTC TCCACTGATT TTGGTGAGTT TGGTGCGGGC AGGATTGCCG
ATAGGGGTTT TGCTACAGCG GGCTTTAAGC GATGGTAGCG CACCTTATCA TTTGCCCAGT
CAGCATTATG GCGTCAGTAT CATCCGTGAT AGAGGGCTAG ATCCGGTGGC CGTCACCAAA
ATCTTGAGCG CTCACCCCAC AAGTCCAATA GTCTTCGTCG ATGGCTGGAC CGGTAAAGGG
GCCATTTATG GTGAGCTGTC ACGCAGCTTA AAGGCTTATT TGGATAAGCA TTGGACGGCA
GATGCAAGCT TTAGCAATGT GTTTCATCAA GGCCGTGGAG TGGTTCCCTT GTTAACCCTT
GCTGACCCTG CGGGCGTGGC GTGGTTATCG GCCAGTAATG AGGATTGGCT GATACCTTCA
GGTCTGCTTG GCAGTACCGT CTCTGGCCTG ATATCACGAA CCTTGTATAG CGCCCCCAAT
CACGACTTAA CATCCGGCTT ACATCAAAGC GTGATTTATC ATGATTTGGC GCATAAAGAT
CACAGTTTAA GCTTTATCGA GGCCATAGAA GACATGCGCC ATCAGCTGCT TTTGCAAAAT
GCCAACACAA CCGCTTTGCC GACTTATGCA GCCCCGCGTT ATCATGCGCA GCGTATTATT
GAGACGTTGG CCAATCACTA TCAGATTAGT AACATCAATC GTATTAAGCC GACCATTGCT
GAGGCTACCC GAGCCGTGAT GCGGCGTGAT CCTGAGCAAG TGTTATTGGC CAGTGCCGAT
CATCCTGACA CGGCATTATT AAGGCATTTG TGTCAACAAA AGGGGGTGGC TGTGACGGTG
ATTGGCGAGC AGATTTTGCC GTATCAAGCG GTGACCATCA TCAAAAAACG TGACCAATAG
 
Protein sequence
MDLHKTTPPS DITSYCGSYL PSDVTLLLDI VDKSGVRDVP VAQKEALIQS GQQHYSDMLT 
LEKAPSDAHE QMYQQALQQG KLRLAQDIIR LSTTLKSLFE TQTNSRSPLI LVSLVRAGLP
IGVLLQRALS DGSAPYHLPS QHYGVSIIRD RGLDPVAVTK ILSAHPTSPI VFVDGWTGKG
AIYGELSRSL KAYLDKHWTA DASFSNVFHQ GRGVVPLLTL ADPAGVAWLS ASNEDWLIPS
GLLGSTVSGL ISRTLYSAPN HDLTSGLHQS VIYHDLAHKD HSLSFIEAIE DMRHQLLLQN
ANTTALPTYA APRYHAQRII ETLANHYQIS NINRIKPTIA EATRAVMRRD PEQVLLASAD
HPDTALLRHL CQQKGVAVTV IGEQILPYQA VTIIKKRDQ