Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0064 |
Symbol | acnA |
ID | 5206514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 76195 |
End bp | 78975 |
Gene Length | 2781 bp |
Protein Length | 926 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598273 |
Product | aconitate hydratase |
Protein accession | YP_001278974 |
Protein GI | 148651881 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGATA TTTTTAACGT CAAAGACAGC TTAACTGTCG CTGGCAAAGA CCATGCCTAC TATAGCCTAC CCAAACTGGC TGAAAAATAC CCCAATATTA ACCGTCTGCC TTACAGCATG AAAGTGGTGT TAGAGAACCT GCTGCGCAAT GAAGATGGTG GACAGTCTGT GGGTGAGAAC CATATTGAAG CAGTCGCCAA CTGGGACGCA GGCGCTGAGG CCTCAAAAGA GATTGCCTTT ATGCCGGCGC GTGTAGTGCT ACAAGACTTT ACGGGCGTGC CCTCTGTTGT AGACTTGGCA GCCATGCGTG ATGCGGTCGT CAAGCTTGGC GGTAAAGCCG ATCAAATCAA CCCTTTTATT CCCAGTGAAC TGGTCGTTGA CCATTCGGTA CAAGTTGATG TCTACGGCCG TGAAGACTCA TTGGATTTAA ACGAGAAAAT CGAATTTAAA CGCAACAATG AGCGCTATGA GTTTTTGCAC TGGGGCAAAA ACGCCTTTGA AAACTTCGTA GTTGTCCCAC CAGCCACCGG TATTGTGCAC CAAGTTAACC TTGAGTATTT AGCACGTGTG GTGATGGCCA GTGAACAAAA CGGTGAGCTC ACCGCTTATC CAGATACCGT CTTTGGTACC GATAGCCACA CCACTATGAT TAACGGTATT GGCGTGCTGG GCTGGGGTGT GGGCGGTATT GAGGCGGAAG CTGCGATGCT CGGACAGCCC TCCTCTATGC TAATCCCGCA AGTGGTTGGC TTTGAGATGA CAGGCAAGCT ACAAGAAGGG GTTACCGCCA CTGACTTGGT ACTGCGTGTG GTCGAAATGC TGCGGGCACA TGGTGTGGTT GGTAAATTCG TTGAGTTCTA TGGCGAGGGC TTACACAGCA TGCCGCTGGC GGATCGTGCA ACGATTGCCA ACATGGCGCC AGAGTACGGT GCCACTTGTG GTATCTTCCC TATTGACCAG ATGGCCATTG ACTATCTGCG CCTATCGGGC CGTGATGAAG CACAAATTGA GCTGGTAGAG CAGTATGCTA AAGCGCAAGG GCTGTGGCAC GATGCCGATA CCCCAGCGGC CACTTACTCA AGTAACCTAC ATCTAGACTT ATCTACTGTA CAGCCTGCAC TGGCCGGTCC AAACCTACCA CAGCAACGCA TCAACTTGGC AGATATGCAT CAAAAATTTG GCGAAACGCT GCATGCCATG ACAAAAGATC GCGCCTCAGA AAAAGAAGGC AAAGTACGCT TTGATGAAGA AGGCGGTGAG CAAGAGCAGG CTGAGCGTCT GTCTGCCAAA CCGAAGGTGT TCTCAAGCAT TGATATCGAT AACAAGACTC ATCAACTACA TGATGGCTCC TTGGTTATCG CTGCCATTAC CTCTTGTACC AACACCTCAA ACCCTGCGGT TATGATTGGT GCTGGTCTGG TGGCCAAAAA GGCAGCGGCC AAAGGTCTAA AAGCCAAGCC TTGGGTAAAA ACCTCTTTGG CTCCAGGCTC AAAAGTGGTC ACTGATTATC TAGAAAAAAC CAAACTGATG GATGAGCTTG AAAAAACCGG CTTCTACTTA GTCGGCTATG GTTGTACCAC CTGTATCGGT AACTCAGGCC CACTTTTAGA AGCGGTTGAA AAAGGCATTG AAGAGAACAA CCTAGTGGCC GCTGCCGTGT TATCGGGTAA CCGTAACTTT GAGGGTCGTA TCCACTCGCA TGTCAAAGCC AGCTATTTGG CGTCTCCACC GTTAGTAGTG GCTTACGCTC TAGCAGGTAC GGTTGATATT GACTTGACCA CACAGCCTCT AGGTCAAGAC CAAGAAGGCA ATGATGTGTT CTTAAAAGAC ATCTGGCCGA CCTCAGCTGA GATTAACGAG CTGATTGCCA ATAATATTGA TGCTGAGATG TTCCGCAAGA ACTATGGCGA AGTATTTAAC GGTAGTGAGG CTTGGAACGC CATAAGCTCA GCCGATAGTC AGCTATATCC TTGGAGCGAT GAGTCGACCT ACATCAAGAA CCCACCGTTC TTCGATGACA TGACCATGGA GCCTGAAGGC ATTAAAGACA TCACAGGCGC GCGTATTTTG GGTCTGTTTG GCAACTCAAT CACCACAGAT CACATCTCAC CTGCGGGCAA TATCGATCCT AATTCACCAG CGGGTAAGTA CTTACAACAG CGCGGCGTAC TGCAAGCAGA CTTCAACAGC TATGGCTCAC GCCGTGGTAA TGATGCGGTC ATGACTCGAG GTACTTTTGC CAATATCCGT ATCAAAAACA AAATGATGGG CGGTAAAGAA GGCGGCTACA CTTATTACTT CAGCGGTGAT AAAGCCACCT TGGAACAAGG TGAAGAGATG GCCATCTATG ATGCGGCGAT GAAGTACAAA GAGGACAAAC GTCCTTTGGT GGTCTTAGGT GGTGAAGAAT ACGGGTCAGG CTCTAGCCGT GACTGGGCTG CTAAAGGTAC TATTTTGCTT GGGGTAAAAG CAGTATTGAC CAGCTCATTT GAGCGTATTC ACCGCTCAAA CCTAGTGGGT ATGGGTGTGC TGCCTTTAAC CTTCAAAAAA GGCGAAAATG CAGACACTTA TAACTTAGAT GGCTCAGAGG TGCTCAGCAT CACAGGGCTT GAAAATGGTG AAAGCAGAAC CGCCACCGTT ACTGCCACAC GCGCTGATGG TAGCTCTGAG AGCTTTGAAG TCAATGTGAT GCTGCAGACG CCAAAAGAGC GTGAATATGT GCGTCATGGC GGTGTATTAC ACTATGTACT GCGTCAACTG GCAGCAGAAA ACCAAGCCTA A
|
Protein sequence | MSDIFNVKDS LTVAGKDHAY YSLPKLAEKY PNINRLPYSM KVVLENLLRN EDGGQSVGEN HIEAVANWDA GAEASKEIAF MPARVVLQDF TGVPSVVDLA AMRDAVVKLG GKADQINPFI PSELVVDHSV QVDVYGREDS LDLNEKIEFK RNNERYEFLH WGKNAFENFV VVPPATGIVH QVNLEYLARV VMASEQNGEL TAYPDTVFGT DSHTTMINGI GVLGWGVGGI EAEAAMLGQP SSMLIPQVVG FEMTGKLQEG VTATDLVLRV VEMLRAHGVV GKFVEFYGEG LHSMPLADRA TIANMAPEYG ATCGIFPIDQ MAIDYLRLSG RDEAQIELVE QYAKAQGLWH DADTPAATYS SNLHLDLSTV QPALAGPNLP QQRINLADMH QKFGETLHAM TKDRASEKEG KVRFDEEGGE QEQAERLSAK PKVFSSIDID NKTHQLHDGS LVIAAITSCT NTSNPAVMIG AGLVAKKAAA KGLKAKPWVK TSLAPGSKVV TDYLEKTKLM DELEKTGFYL VGYGCTTCIG NSGPLLEAVE KGIEENNLVA AAVLSGNRNF EGRIHSHVKA SYLASPPLVV AYALAGTVDI DLTTQPLGQD QEGNDVFLKD IWPTSAEINE LIANNIDAEM FRKNYGEVFN GSEAWNAISS ADSQLYPWSD ESTYIKNPPF FDDMTMEPEG IKDITGARIL GLFGNSITTD HISPAGNIDP NSPAGKYLQQ RGVLQADFNS YGSRRGNDAV MTRGTFANIR IKNKMMGGKE GGYTYYFSGD KATLEQGEEM AIYDAAMKYK EDKRPLVVLG GEEYGSGSSR DWAAKGTILL GVKAVLTSSF ERIHRSNLVG MGVLPLTFKK GENADTYNLD GSEVLSITGL ENGESRTATV TATRADGSSE SFEVNVMLQT PKEREYVRHG GVLHYVLRQL AAENQA
|
| |