Gene PsycPRwf_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0057 
Symbol 
ID5205031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp71419 
End bp72117 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content48% 
IMG OID640598265 
Productphosphoglycolate phosphatase 
Protein accessionYP_001278967 
Protein GI148651874 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.049028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGA CTATGACCGC AAAAAAGCTG CTTATTTTTG ATTTTGACGG CACCTTAATT 
GATAGCGTGC CTGATTTGGC CGAAGCCACC AATACCATGC TTACCCGTCT TAATAAAACG
CCTTATCCCG TCGATATGAT TCGCAACTGG GTGGGTAATG GCTCACGTAT GCTAGTAAAA
CGCGCACTGG TAGGCGCTAT AGAGGTCGCT GAGGGTCAAT TAACCTCAAC TGCGGTAGAC
CATGCCGAAT CGGTATTCTT CGATGCCTAT GCGCAAATTA GCGGCCAAAA CACCGTTGCC
TATCCCCATG TCGATAGCGG ACTAAAGCAG CTCAAGCAGG CCGGCTTTAC GTTGGCGCTG
GTGACCAATA AGCCCATTCA GTTTGTGCCT AAGATTTTGC AATCCTTTGG CTGGCAGTCC
CTGTTTGAGC AAGTACTGGG CGGTGACAGC TTACCGGTCA AAAAGCCCGA CCCTGCCCCG
CTGCTGCATG TGTGTGAAAC CTTAGATATC TCGCCTGAGC AAGCGGTGAT GATTGGCGAC
TCAAAAAATG ATATTTTGGC CGGCCAAAAC GCCAATATGG ATACGCTTGG GCTATCTTAC
GGGTATAATT ACGGCCAAGA TATTCGAAGT CTTAATCCCA CCGAAGCTTT TGATGACTTT
CAAAGCTTGG TGGACTGGCT TATTAAGCAT GGCGCATAG
 
Protein sequence
MIMTMTAKKL LIFDFDGTLI DSVPDLAEAT NTMLTRLNKT PYPVDMIRNW VGNGSRMLVK 
RALVGAIEVA EGQLTSTAVD HAESVFFDAY AQISGQNTVA YPHVDSGLKQ LKQAGFTLAL
VTNKPIQFVP KILQSFGWQS LFEQVLGGDS LPVKKPDPAP LLHVCETLDI SPEQAVMIGD
SKNDILAGQN ANMDTLGLSY GYNYGQDIRS LNPTEAFDDF QSLVDWLIKH GA