| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0031 |
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| Symbol | |
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| ID | 5205981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 41323 |
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| End bp | 42834 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640598239 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001278941 |
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| Protein GI | 148651848 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTCAAA AAACCACCCC TAATAAACAA CTCGATCTCA CCCAAGGGTC GATCGCCAAA
ACCATGCTGC TGTTCGCACT TCCCACATTG GGGTCGTCGA TACTGCAGTC GTTAAATGGG
TCGATAAATG CGGTCTGGGT GGGCCGATTT TTGGGAGAAG AAGCACTGGC CGCCACCGCC
AACGGCAATA TTGTCATGTT CATCTTGATC TCTTTTGTGT TTGGCTTTGG TATGGCCTCT
ACCATCTTGA TTGGGCAAGC CATGGGACAG CGTGACAACG TGATGGTCAA GCGCACGCTC
GGCACAGCCC TTGGCAGCAT TATTCCTATC AGTGCCATAT TGGCTACTAT AGGCTGGCTA
TTTGCGCCCA ACTTGCTCGA TATATTAGGC ACGCCAAGCA GTGCCTTTGA TTTGGCATTG
ACGTATCTGC GCATGATTTT TGTGGCCATG CCGATCACCC TCACCTTCAC TTTGATGATG
ATGGCGCTAC GAGGAACGGG CGACTCTAAA ACCCCGCTTT GGTTTATAGC GCTGTCGGTG
GCTATAGATT TGATTTTGAC GCCTCTGCTT ATTATCGGCG TGGGTCCTTT TCCTGAGTGG
GGCATCTTTG GCTCAGCCTT TGCGACGGCT GTTGCCAATA CATTGGCGCT GATTGGTATG
ATTATCACCC TGTATTTGCG CGGCTCAGTA CTTGCTCTTA ATAGGTCTGA CTTACGCTTT
TTGCGCCCTG ATCGAGGTAT TCTTGCCTCG ATGTTTTCTA AAGGGTTGCC GATGGGTCTA
CAAATGATAG TCATCTCTTC GGCCGCATTG ACTATGCTCT CGCTGATTAA CCGCGAAGGG
GTGCAGACGA CCGCAGCCTA TAGTGCCACT CAGCAGCTCT GGACCTATGT GCAGATGCCA
GCAATGGCGC TCAGTGCCGC AGCCAGTGCT ATGGTGGCCC AAAATATCGG TGCCAACCAA
TGGCATAGAG TCTCTGACAT CACCCGTTGG GGGCTTATTT TTAACGTATT ATTGACAGGT
CTACTTATCG GAGCACTGAC TTTATTCGAT AAATCCATAT TAAGTTTATT CTTGGGCACT
GACAGTACTG CGTTGCCCAT CGCCAGTCAT ATTCAGATTA TGGCGACGTG GGGGTTTTTA
TTCTTCGGGA TAGCTCAGGT ATTCTTTGGT ACGATGCGAG CAAATGGCTA TGTGATTTGG
CCATTGATGG TGATGGTCAT CTCTATGTAT CCGGTACGTC TTGGCTTTGC TTTTGGCTTC
TACTCCTGGC TTGGCGCCGA TGCATTGTGG CTGTCGTTCC CTGCGGGGAT GGTGGCGACT
GCGGTTATGG GTGCAGGGCT ATATCTACAT GGCAAATGGC GTAAAGGTCA GGTGTTACCG
CCCAAAGAAG CGGCGCAAAT CACTGAGGGC TACCGTGCTC AGGGAAGCTG TAGCGCCTCA
TGTCGTGATG TGGCCTCCAC TACGGCGTGG GAGCCTTTAG AGGATCAGCA AGTTGCGGCT
CGTCGGTCTT GA
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| Protein sequence | MSQKTTPNKQ LDLTQGSIAK TMLLFALPTL GSSILQSLNG SINAVWVGRF LGEEALAATA
NGNIVMFILI SFVFGFGMAS TILIGQAMGQ RDNVMVKRTL GTALGSIIPI SAILATIGWL
FAPNLLDILG TPSSAFDLAL TYLRMIFVAM PITLTFTLMM MALRGTGDSK TPLWFIALSV
AIDLILTPLL IIGVGPFPEW GIFGSAFATA VANTLALIGM IITLYLRGSV LALNRSDLRF
LRPDRGILAS MFSKGLPMGL QMIVISSAAL TMLSLINREG VQTTAAYSAT QQLWTYVQMP
AMALSAAASA MVAQNIGANQ WHRVSDITRW GLIFNVLLTG LLIGALTLFD KSILSLFLGT
DSTALPIASH IQIMATWGFL FFGIAQVFFG TMRANGYVIW PLMVMVISMY PVRLGFAFGF
YSWLGADALW LSFPAGMVAT AVMGAGLYLH GKWRKGQVLP PKEAAQITEG YRAQGSCSAS
CRDVASTTAW EPLEDQQVAA RRS
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