Gene PsycPRwf_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0022 
Symbol 
ID5204495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp32839 
End bp33759 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID640598230 
Productalkaline phosphatase 
Protein accessionYP_001278932 
Protein GI148651839 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGC TTATATTTCG GCGGCTATTA GAAGCCATTC CCACCATGTT TATCCTTATT 
ACCGTGTCAT TTTTTATGAT GCGATTGGCG CCGGGTAGTC CGTTTAGTGG CGAGCGTAGC
TTTTCACCCG CGGTAATGGC CAATATTGAA GCCAAATATC ACTTAAATGA CCCCATGTGG
CTGCAATATG TGCATTATTT AAAGCAAATT GCAGTGGGCG ACTTTGGCCC CTCCTTTAAG
TACAAAGACT ACACCGTCAA TGAGCTGTTA TCACAAGCGC TACCGGTTTC GGTGGAGCTG
GGCCTTTATG CCTTTATCTT AGCCTTAGTG CTCGGACTGA TCTTCGGTAT TGTCGCCGCT
TTAAAACAAA ACTCATGGAT TGACTATATC GTTATGGCTT TTGCCAATAT CGGGGTGGTT
ATTCCAAGCT TTGTCAAAGC GCCCCTGTTG GTACTTATTT TTGCCATTAC TTTAAAGTGG
CTGCCCGGTG GCGGCTGGAA TGATGGGGCG GTACAAAACC TTATCTTGCC GGTGACGGCA
CTGGCTTTGG CTTATACTGC CAGCATCGCG CGTATCATGC GCGGCTCTAT GATTGAGGTG
ATGAACAGCC AGTATATCCG TACCGCACGT GCCAAAGGCT TGCCGATGCA GCGTATTGTA
TTTAAGCATG CACTGCGCCC AGCGATGCTG CCGGTTATCT CATATTTAGG CCCTGCTTTT
GTGGGTATTA TCACCGGCTC AATTGTGATT GAGACCATTT TTGGTCTGCC CGGTATCGGT
CAATTATTCG TTAATGGCGC CTTAAACCGT GACTATGGCA TGGTGCTTAG CTTAACCATT
TTGGTGGGCG TATTGACCAT TGCCTTTAAC GCCATTGTCG ATATTTTATA CGCAGTTATT
GACCCACAGA TTAAGTACTA G
 
Protein sequence
MLKLIFRRLL EAIPTMFILI TVSFFMMRLA PGSPFSGERS FSPAVMANIE AKYHLNDPMW 
LQYVHYLKQI AVGDFGPSFK YKDYTVNELL SQALPVSVEL GLYAFILALV LGLIFGIVAA
LKQNSWIDYI VMAFANIGVV IPSFVKAPLL VLIFAITLKW LPGGGWNDGA VQNLILPVTA
LALAYTASIA RIMRGSMIEV MNSQYIRTAR AKGLPMQRIV FKHALRPAML PVISYLGPAF
VGIITGSIVI ETIFGLPGIG QLFVNGALNR DYGMVLSLTI LVGVLTIAFN AIVDILYAVI
DPQIKY