| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0020 |
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| Symbol | |
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| ID | 5204493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 29321 |
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| End bp | 30997 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598228 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001278930 |
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| Protein GI | 148651837 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCAT CTTCGCGCAG GACTTTAAAA GCACTCCCTT CAATCACCTT AACTGCGGCG
ATAACCACTG CCGTTTTTTT AAGTGGCTGT GGCGACAAGG AGGCCAGTAA TGCTGGGGCC
TCAGCTAAGA TAGACCCTAA TGTCTTGGCC GAAAAACAGC AGATTGTTAT TAACAATGGC
ACTGAGCCTG AGTCGCTTGA TCCGCATAAG ATATCCGGCC TACCTGAAGC CAATATTATC
CGTCAGCAGC TGGTGGGGCT CGTCACTACT GATGCTAAAG GTAAGACCAT TGCTGCGATG
GCTAAGAGCT GGCAGAGTGA AGATAACAAG GTTTGGGTGT TTAAACTGCG TGATGCCAAA
TGGTCAAATG GCGATCCTGT GACCGCACAA GACTTCGTCT ATAGCTTACG CCGAGTGGTG
GATCCTAAGA CCGCATCACC ATATGGCAAC TACTTGGTCG ATGCCAAAGT GGTGGGCGCT
GAAGCCATCA TCAATGGTAA GCAAAGCCCA GATACGTTAG GTGTTAAAGC TTTGGATAAT
AAAACCTTAG AGGTGAGATT AACTGAGCCG GTACCTTACT TTGTCGATAT GCTGATACAT
ACCTCAACCT CTCCGGTACA TCCGGCCACG GTTGAAAAAT TTGGGGTGAA ATGGACCGAT
CCTAAGAACA TAGTGGTCAA TGGCCCTTAT AAAATTAGCG AGTGGTCGGT CAATGACAAG
ATAGTGCTGC AGCGTAATCC GGCCTATTAC GACAATGCCC ACACCACCAT AGATACCATT
ACTTTACTGC CGATTGAGTC GGAGACCACC AATGTGGCCC GTTATAAAGC GGGTGAAATT
GATATTGGTG CCGGCATGCC AACTGAGCAG TTTGATGAAT TAAAAGCAGA GCTGGGTGAT
CAAATTCAAG TCTCACCAAG CTTGTGCAGT TTTTATTATC AGTACAACAA CAAAAAGCCA
CCTTTTGACG ATGTGCGGGT GCGCCGAGCG CTGGCCATCG CCTTAGATCG CGATACCATC
ACCCAAAAAG TGATGGGACA AGGTCAAACG CCAGCGTATC AATACACGCC GCCGTCGATT
CAAGGAATGA CCCCTTTTAC ACCTGAGTGG CAAAGCTGGG ATCAGAAAAA ACGGGTTACA
GAGGCCAAAA AGCTACTCAA TGAAGCCGGC TACAACGAGC AGCATCCGCT GAAGTTTGAG
TTGTTGTACA ACACCAATGA AGGCAATAAA AAGCTGGCTG TGGCCACAAG CTCGCTACTA
AAAGAGGCCA TTGGCTTTGT CGATGTGAGC CTAATGAACA AAGAGTGGAA AACCTTTTTG
GACACCTTTC GTAATGGTAA TTATCAGCTG GCACGCTATA CCTGGTGTGG CGATTATAAC
GAGCCATCTA CCTTTTTGAA TATTGCCAAG AGCGGTAATA GTAATAACTG GGGCGGTTAT
TCTAGTGTTA AGTTTGACAG CATTATGAAT CAAACGCTCA AAGAGGGCGT GACCGCCGAG
CAGCGAGCAG AGCTGTATCG TCAAGCGGAA GCTCAGCTCG ATGCTGATAT GCCACAGCTT
AATGTATTCC ATATCGTCAA GCTCAGCATG GTTAAGCCTT ATGTGATCAA TTTTCCTTTG
CAAGATCCTT TGAGCAATTG GCAGATTAAG GATGTCTCTA TCGCCAAGCA TGACTAA
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| Protein sequence | MVSSSRRTLK ALPSITLTAA ITTAVFLSGC GDKEASNAGA SAKIDPNVLA EKQQIVINNG
TEPESLDPHK ISGLPEANII RQQLVGLVTT DAKGKTIAAM AKSWQSEDNK VWVFKLRDAK
WSNGDPVTAQ DFVYSLRRVV DPKTASPYGN YLVDAKVVGA EAIINGKQSP DTLGVKALDN
KTLEVRLTEP VPYFVDMLIH TSTSPVHPAT VEKFGVKWTD PKNIVVNGPY KISEWSVNDK
IVLQRNPAYY DNAHTTIDTI TLLPIESETT NVARYKAGEI DIGAGMPTEQ FDELKAELGD
QIQVSPSLCS FYYQYNNKKP PFDDVRVRRA LAIALDRDTI TQKVMGQGQT PAYQYTPPSI
QGMTPFTPEW QSWDQKKRVT EAKKLLNEAG YNEQHPLKFE LLYNTNEGNK KLAVATSSLL
KEAIGFVDVS LMNKEWKTFL DTFRNGNYQL ARYTWCGDYN EPSTFLNIAK SGNSNNWGGY
SSVKFDSIMN QTLKEGVTAE QRAELYRQAE AQLDADMPQL NVFHIVKLSM VKPYVINFPL
QDPLSNWQIK DVSIAKHD
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