| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0019 |
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| Symbol | |
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| ID | 5204492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 27558 |
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| End bp | 29159 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640598227 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001278929 |
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| Protein GI | 148651836 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGG TCGGATGTGG TGATAAATCA GCCAGCAGTG GCAGTTCAGC CAAAGTAGAC
CCCAATGTTT TAGCCGATAA GCAAGAGCTG GTTATTAATA ACGCAGCTGA GCCTGAGTCA
TTAGACCCAC AAAAAGTCTC TGGGGTACCA GAAGCGGCAG TCATTCGTCA AATGCTGGTG
GGTCTAACCA CCACAGACCG AGATGGCAAA ACCATTCCTG GCATGGCCGA AAGCTGGGAG
AGCACAGACA ATAAAGTTTG GACCTTTAAA ATTCGTGATG CCAAATGGTC AAACGGTGAC
CCGGTTACTG CCAATGACTT CGTGTACAGC TGGCGCCGTC TGTTAGATCC CAATACAGCA
TCCCCTTATG CCAGTTACTT AGTCGATGCC AAAGTGGCGG GCGCTGAGGC CATCATGGAA
GGTAAAGCTG CGGTAGATAG CTTAGGGGTT AAAGCCCTTG ATGATAAAAC CTTACAAGTG
ACTTTATCAG AGCCTGTGCC TTATTTCCCA GACACTTTAA TCCATACCTC TGTAAAACCT
GTGAACCAAA AAGCGGTAGA GCAGTTCGGT GATAAATGGA CCGATCCGGC CAATATCGTG
GTCAACGGCC CATACAAAAT TAGCGAATGG CAGGTCAACG ACAAGATTGT GTTAACCCGT
AACGAGAGCT ACTACGACAA TGCCAACACC ACCCTAGAAA AAATTACCAT GTTGGCCATC
CCCTCTAGCA CCACCGACGT GGCACGCTAT CAGGCTGGTG AGATTGATGT GACGAATGAA
GAATTGCCCT CAGAGCAGTT CAAGTCTTTA AAAGAGCAGT TGGGTGATGA GGTAAGCGTA
TCGCCTATGC TATGTACTTA CTACTACGAG TTTAATACCG TTAAGCCGCC ATTTAATGAT
GCGCGCGTCC GCCGTGCTCT GGCCTTAGCG TTAGACCGTA ACACCATTAC CGATAAGGTC
GTCGGACAAG GTCAGACGCC CGCTTATCAG TTAACTCCAG TATCGACCAA TGGCATGGAA
AACAACACAC CTGAATGGCA AAACTGGGAT CAAGCACGCC GTGTAGAAGA GGCGAAGAAG
CTACTTAATG AGGCCGGATA TAGCGAATCT AAGCCCCTAA AATTTGAGCT GTTATATAAC
ACCAGTGACA ACCACAAGAA AATCGCTGTC GCGGCAAGCT CGTTATGGAA GCAGTCACTT
GGTTTCGTTG ACGTAAGCTT AATTAACAAA GAGTGGAAAA CCTATCTAGA TACGCGCCGC
AATGGTAACT ATCAAGTGGC CCGTGCGGGC TGGTGTGGCG ATTATAACGA GCCTTCTACC
TTCTTAAATA TCGTCAAATC TGGCAACAGT AATAACCAAG GTAAGTACTC AAGTGCCGCC
TTTGATAGCT TGATGACTCA AACCTTAAAA GCGGGCGTTA CCCCAGAGCA GCGTGCTAAC
TTGTACAAAC AAGCAGAAGT GCAGCTTGAC AAAGACATGC CAAATATCAA CGTCTACCAC
TATGTAAGCC CTCGTCTTAT CAAGCCTTAT GTGGTCGGCT TCCCAGTTAA TGATCCTTTA
AACAACTGGC AAGGTAAAGA TCTAAAAATC GCTAAGCATT AA
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| Protein sequence | MMMVGCGDKS ASSGSSAKVD PNVLADKQEL VINNAAEPES LDPQKVSGVP EAAVIRQMLV
GLTTTDRDGK TIPGMAESWE STDNKVWTFK IRDAKWSNGD PVTANDFVYS WRRLLDPNTA
SPYASYLVDA KVAGAEAIME GKAAVDSLGV KALDDKTLQV TLSEPVPYFP DTLIHTSVKP
VNQKAVEQFG DKWTDPANIV VNGPYKISEW QVNDKIVLTR NESYYDNANT TLEKITMLAI
PSSTTDVARY QAGEIDVTNE ELPSEQFKSL KEQLGDEVSV SPMLCTYYYE FNTVKPPFND
ARVRRALALA LDRNTITDKV VGQGQTPAYQ LTPVSTNGME NNTPEWQNWD QARRVEEAKK
LLNEAGYSES KPLKFELLYN TSDNHKKIAV AASSLWKQSL GFVDVSLINK EWKTYLDTRR
NGNYQVARAG WCGDYNEPST FLNIVKSGNS NNQGKYSSAA FDSLMTQTLK AGVTPEQRAN
LYKQAEVQLD KDMPNINVYH YVSPRLIKPY VVGFPVNDPL NNWQGKDLKI AKH
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