| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0010 |
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| Symbol | |
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| ID | 5204853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 13470 |
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| End bp | 15656 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640598218 |
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| Product | KAP P-loop domain-containing protein |
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| Protein accession | YP_001278920 |
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| Protein GI | 148651827 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4928] Predicted P-loop ATPase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00154725 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAATG AATCATACTC TTCGGACGCT CCAGTTTCTA AAATAGATGA GGATGCGTTT
TCACGTTGGA GTTTCTCTAA AAGGGTCGCT CAAGTTATCG CAAATCGACA AGATCCAAGC
AGTATTGTTA TTGGTCTATA CGGTGCATGG GGTGATGGTA AAACTTCAGT ACTAAACTTT
ATCGATCAAT CCTTAACTAA TAATGAAGCG GTAATCTGTA TTAGATTTAA TCCATGGAGA
TTTGGTACTG AAGATCAGCT TCTATTAGGC TTTTTTAATC AAATAGCAGA TGCATTAGAT
AACAAGCTAA CTACATCAAG TGATAAATTA AAAGATATTG GAAATAAAAT ATTAAAGCCT
GTAACCAAGT TAGCTAATGT AGAAGCAGTA GGAGAGATTG TTACTTCATT TATATCTATG
CCTGATATAG ATATCTTCAA GGAAAGAACC GAAAAGTTGT TAGAAGAATC CAAAAAACGT
GTATTAATTC TAATTGATGA CGTTGATAGA CTGGATAAAA CAGAAATCCA TACTCTCTTC
CGTTTAGTCA AGTTAACAGC GGATTTCAAA TATACATCTT ATATTCTAGC ATTTGATAAA
GATATCGTAT CTTCATCATT ACAAGACAGG TATTCAAGCT CTCAAGGTAA CTCAGGTGAA
GCTTTTCTAG AAAAAATTAT TCAAGTTCCT CTAAACCTTC CATATATCGA TAAATCAACT
TTAAGAAGCT TTTGCTATCA AGGTATCGAT GAAGCATTAC AACTAGCTAA TATTGAACTA
ACTCAAGAAC AAATTCAAAG ATTCTCTAGC AATTACCTAT CTGCTTTTGA AAGCTGCATA
TCTACCCCTA GAAAAGCAAA GCTCTATAGT AATACACTTA TGTTTTCCTT ACCGATATTA
AAGGGTGAGG TTAACCCCAT TGATTTAATG CTTATTGAAG GTATCAGACT CTTTTATCCA
AAGCTTTACG ATTTCATTAA AAATAATCAA GACTTATTTG CAGGTACTTT TATTTCAAGT
CAATATGGAA ACGATAACGC AAATAAAGAA TATATCAAAA AACTAATTGA TGAGACCATA
TTAAATCTTA GTGCAACAGA AAAAGAAGGC ATAGTAGAGT TACTTAAAGA TATATTCCCT
AGGTTACAAG CCGTTTATAA TAATACCTAT CATTCCGGAG ACTCCCTCAA AATATGGGAA
GAAAATCAGA ATATTTGTTC TAAAAACTAC TTTTTTAGAT ATTTTGGATA TTCTTTACTA
CCCAATGATA TCTCTGATAC TAATCTCAAT CTGCTAGTAC AAGATATAAA TAATTGGCAA
CCACCTTATT CGACTGAAAC TAACCCATTA TATGTAGCTT TGACTCCTGA AAATGCTGAT
ACTTTAATAC AAAAGCTGTA TAAAAAAGTT GCAAGTCTAG ATTCAGGAGG CTCCACTAAA
ATGGCGATTG CTATCACTCA AATTAGTGAA AAACTACCTG CTGAAAATAG CTTCATGTGG
TCAGATGCTT ATACACAATC GACTTGGCTA ATAGCTGACC TTATACTTAA CATTTCTAAG
GTTGAGCGAG TTAAAGTGAT TAAAAATTTA TTTAATCATG CAAATACGAT TGACTATCAA
ACAAAAATTT TCAGATTTTT AAAGCATGAC CAAAGAGATG ACGCACAACT AAATTATCTT
AGCTCAGAGG AAATGAGGGA TATTGGTACT CATTTAGCAA GAAAAATATT AGCTGAAATT
CAAGATAAAG ATATTACCTT AGATGAGAAG AATCCTACAT CTTATATATT TTGGTTACTC
AATAAATATA TTAATCAAGA TGTCGTCAAC GACTATATTG AAAAGATAAT AAGAACTGAT
GATAATGCTA TTTATCGAAT ACTGGATAAT TACACTACAA CCTTTACAAA CCTAGTTAAC
GGTATAGAAA GAAAAGATGA TTTAAACCAA AATAGCTTTA ATTATCTATC CAAGCATATT
AATGTATCAA TTATATATCA AGCAATAGAA CGTCACTATC CAGAACTTAC TAGGGTGTTA
AAAAACTACC CAAACATTGA AAAAGGGGAG AATGATAGAG AGACTCCTAT TATCCAACAG
TTTTTGTGGT GGTATAGACG AGATATGACC CATCGTAGCT TTGAGTTTGT TTCATCTAAA
GCTGGTTTAA TCTCTGTACT CATCTAG
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| Protein sequence | MQNESYSSDA PVSKIDEDAF SRWSFSKRVA QVIANRQDPS SIVIGLYGAW GDGKTSVLNF
IDQSLTNNEA VICIRFNPWR FGTEDQLLLG FFNQIADALD NKLTTSSDKL KDIGNKILKP
VTKLANVEAV GEIVTSFISM PDIDIFKERT EKLLEESKKR VLILIDDVDR LDKTEIHTLF
RLVKLTADFK YTSYILAFDK DIVSSSLQDR YSSSQGNSGE AFLEKIIQVP LNLPYIDKST
LRSFCYQGID EALQLANIEL TQEQIQRFSS NYLSAFESCI STPRKAKLYS NTLMFSLPIL
KGEVNPIDLM LIEGIRLFYP KLYDFIKNNQ DLFAGTFISS QYGNDNANKE YIKKLIDETI
LNLSATEKEG IVELLKDIFP RLQAVYNNTY HSGDSLKIWE ENQNICSKNY FFRYFGYSLL
PNDISDTNLN LLVQDINNWQ PPYSTETNPL YVALTPENAD TLIQKLYKKV ASLDSGGSTK
MAIAITQISE KLPAENSFMW SDAYTQSTWL IADLILNISK VERVKVIKNL FNHANTIDYQ
TKIFRFLKHD QRDDAQLNYL SSEEMRDIGT HLARKILAEI QDKDITLDEK NPTSYIFWLL
NKYINQDVVN DYIEKIIRTD DNAIYRILDN YTTTFTNLVN GIERKDDLNQ NSFNYLSKHI
NVSIIYQAIE RHYPELTRVL KNYPNIEKGE NDRETPIIQQ FLWWYRRDMT HRSFEFVSSK
AGLISVLI
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