Gene PsycPRwf_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0008 
Symbol 
ID5204851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp11220 
End bp12026 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content51% 
IMG OID640598216 
Productenoyl-CoA hydratase 
Protein accessionYP_001278918 
Protein GI148651825 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000022678 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAATA ATAGCCAAAA TAATGCCCCA TTCACTCGTC TCACTTATCA ACAAGATGGC 
CACATCTGCC TAATCGGTCT GAACCGAGTC GATAAACGTA ATGCTTTTGA TAGCCATATG
ATTGCCCAGT TATCAAAGGC ACTAACTGAC TATGAAGCCG ACAGTAATTT GCGCTGTGCG
CTCATCTTTG CTCATGGCGA GCACTTTACC GCAGGTCTGG ATCTCATGGA GCTACAAGAC
AAGCTTGATA AAGGGGTGTT TGCATTTGAT GAGTCTCAAA TCGATCCTTG GGGCATCAGT
GGTAAGCTGC GTACCAAGCC TGTGGTAGTG GCAGTACAAG GTACTTGTTT CACGGCCGGT
ATTGAGCTGA TGCTAAATAG CGATGTGGTA ATCGCCAGTG ACGACTGCAA CTTTGCCCAG
ATGGAAGTGC AGCGCGGCAT CATGCCGTTT GGCGGAGCGA CGGTGCGTTT TGTGGCGGCG
GCAGGTTGGC AAAAAGCCAT GCCATATTTA TTAACCGGTA AGCCCTTTGA TGCCAATACT
GCTGACAAAT TAGGTTTGGT GAGCGACGTG GTACCCAAAG GTGAGCAGTA CGACCGGGCC
TACGAGTTGG CAACTGAGAT TAGCAAGGCG GCACCGCTAG GCGTGCAAGG GGTATTGGCA
TCTGCATTAG ACGGCGCGCG CAATGGGGCA GACAGTGCTA TGGCCAATAT CCACAGCTTT
TTACCGCCCT TATTTGAGTC GGAAGATGCC CGTGAGGGCG TGATGGCGAT GGTTGAGCGC
CGTGAGGCCA ACTTTAAGGG ACGTTAA
 
Protein sequence
MSNNSQNNAP FTRLTYQQDG HICLIGLNRV DKRNAFDSHM IAQLSKALTD YEADSNLRCA 
LIFAHGEHFT AGLDLMELQD KLDKGVFAFD ESQIDPWGIS GKLRTKPVVV AVQGTCFTAG
IELMLNSDVV IASDDCNFAQ MEVQRGIMPF GGATVRFVAA AGWQKAMPYL LTGKPFDANT
ADKLGLVSDV VPKGEQYDRA YELATEISKA APLGVQGVLA SALDGARNGA DSAMANIHSF
LPPLFESEDA REGVMAMVER REANFKGR