Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0006 |
Symbol | |
ID | 5204849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 8933 |
End bp | 9520 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598214 |
Product | hypothetical protein |
Protein accession | YP_001278916 |
Protein GI | 148651823 |
COG category | [S] Function unknown |
COG ID | [COG1971] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000857448 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000941545 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGACG TTCTATTTTT GGCCATTGCT TTAGCAATGG ATGCGTTTGC TGTGTCTATT GGACTGGGGG CAAAACAGGC CAATACTGCC TTTTCAAGCG CAGCAAAGGC AAAGTCTATG TTATTAAAGC TGGCACTGAT GGCAGCACTT TACTTCGGTG TGGCTCAGGG CGTGATGCCT TTGATTGGCT ATTTATTGGG ATCAGCTTTG CTTGGATGGT TGGCCTCCGC AGCCCCTTGG ATTGGCTGTA TTATCCTCAT TGGTCTGGGC GCAAAGATGC TATATGAGGC CATACAGGGT GACCATGAAG AAGAGGAGCT CGGGCTAGAT GACAATCAGA GCGTCGATCA CAAACTGATG GGCACGATGG CGATTGCTAC CAGTATTGAT GCGATGGCAG CAGGATTTAC CTTAAACTTA TTAGCCGTCA ATGCTTGGCT GGCCTGCTTA ATTATAGCGC TTGTGACCGC TTTATTTAGC TTCTTTGGGG TATATTTAGG CCGTCAATCA GGAACCTGGC TTGAAGATAA AGCGGAAGTT GTGGGCGGTG TGGTGCTGAT TGCCATTGGT ATCAAGATGG TTTTATAG
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Protein sequence | MIDVLFLAIA LAMDAFAVSI GLGAKQANTA FSSAAKAKSM LLKLALMAAL YFGVAQGVMP LIGYLLGSAL LGWLASAAPW IGCIILIGLG AKMLYEAIQG DHEEEELGLD DNQSVDHKLM GTMAIATSID AMAAGFTLNL LAVNAWLACL IIALVTALFS FFGVYLGRQS GTWLEDKAEV VGGVVLIAIG IKMVL
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