Gene PsycPRwf_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0006 
Symbol 
ID5204849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp8933 
End bp9520 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content47% 
IMG OID640598214 
Producthypothetical protein 
Protein accessionYP_001278916 
Protein GI148651823 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000857448 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000941545 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGACG TTCTATTTTT GGCCATTGCT TTAGCAATGG ATGCGTTTGC TGTGTCTATT 
GGACTGGGGG CAAAACAGGC CAATACTGCC TTTTCAAGCG CAGCAAAGGC AAAGTCTATG
TTATTAAAGC TGGCACTGAT GGCAGCACTT TACTTCGGTG TGGCTCAGGG CGTGATGCCT
TTGATTGGCT ATTTATTGGG ATCAGCTTTG CTTGGATGGT TGGCCTCCGC AGCCCCTTGG
ATTGGCTGTA TTATCCTCAT TGGTCTGGGC GCAAAGATGC TATATGAGGC CATACAGGGT
GACCATGAAG AAGAGGAGCT CGGGCTAGAT GACAATCAGA GCGTCGATCA CAAACTGATG
GGCACGATGG CGATTGCTAC CAGTATTGAT GCGATGGCAG CAGGATTTAC CTTAAACTTA
TTAGCCGTCA ATGCTTGGCT GGCCTGCTTA ATTATAGCGC TTGTGACCGC TTTATTTAGC
TTCTTTGGGG TATATTTAGG CCGTCAATCA GGAACCTGGC TTGAAGATAA AGCGGAAGTT
GTGGGCGGTG TGGTGCTGAT TGCCATTGGT ATCAAGATGG TTTTATAG
 
Protein sequence
MIDVLFLAIA LAMDAFAVSI GLGAKQANTA FSSAAKAKSM LLKLALMAAL YFGVAQGVMP 
LIGYLLGSAL LGWLASAAPW IGCIILIGLG AKMLYEAIQG DHEEEELGLD DNQSVDHKLM
GTMAIATSID AMAAGFTLNL LAVNAWLACL IIALVTALFS FFGVYLGRQS GTWLEDKAEV
VGGVVLIAIG IKMVL