Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0004 |
Symbol | |
ID | 5206390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 4455 |
End bp | 5834 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640598212 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_001278914 |
Protein GI | 148651821 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000185979 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000160944 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGACGC AACTGAGCAT TCATCAATTA CGTAATTTGC ATTCCGTTAA TATTAAAGTC GGGCAGTGTA ACGTGTTTGT GGGTGCCAAT GGCAGTGGTA AGACTTCTTT ACTAGAGTCA TTGTATCTGC TATCGCGGGG TAAAAGCTTT CGTCATCATC AGCCCAAGCG ATATATCTCA CATCATGCTG CGCACGCCAC TGTCCATGCC AAGTTTGCCA ATGGCAGCAG TATGGCCATC CAAAAGGCGC AAGATGCCAG CACCATTCTG CGCTTAGATC AGCAGACAGT ATATGTACAA AGTGCCTTGG CTAAGCAGTT GCCCACCTTG CTCATTGATC CCTCATCGAT GGATGTGCTT GAAATAGGTA GCAGCAGTCG TCGTCAGTTA TTAGACTGGA TAACGTTTCA CGTGAAACCT GGATTTCATG CACAGTGGTT GGCTTACCAA CGTCTATTAA AGCAGCGCAA TACTATTTTA AGGCAGTCTG GGTATTTGTC CGATTATCAA AGACAAGAGT TGGCAGCTTG GGACAAGGGG CTGGCCAATC ATGCCGCTTT AATTACTCAT TATCGCCATG AGGCATTTGA GGAGTGGCAG CCCTTATTCA ATCAATTAAT TGAGCAGTTG TTGCCAGATT ACGCTCCTTT TATTCAGCTC AGGTTCTCTG CCGGATACAA CACGGATCTG CCTTTAGATG AGTTATTGCA GCAGCGTCTG GCGCAGGATT TTCAGACGGG TTATACCCGA GTTGGCTGTC ATAGAGCAGA TATACAGGTG CTTTGGCTTG AAGATGCACA GGCGAGACAG ACCGTACAGC AAGCTGCTGA AACATCGGGT ATGGCGCAGA CTGCTGCTCA TTCCAATATT CATTCTCATG CTGACATAAA GTTATCCACA GACCTTGTGG ATAATATAGA GGATATGAAT AACTGGGAAG ATGAGACCGC TTATGCCTTG ACAGGTAACG TGCGAGAGCA GGCTGCTAAT GTATTATCAC GTGGTGAGAA AAAACTGTTA ATTACCGCAC TTCGCTTGTC TCAGCTACCT TTACTATCCA CAAAACTATC CACAAAGTTA TCGCTCACTG AGTCTGCCGC TGTGACAGAC ACTGTTATAG GCTCTAATAG CGCCTCTGAA GACCAACCAT ACCCTTCGGC TTTAAGCGAT GCCATATTAC CTGTGGTCTT ATTAGATGAT ATCACTGCTG AGCTGGATGA AAGGGCGCTG AGTATCTTGC TTAAGACGCT CTCTGAGTTG TCATGCCAGA TATTTATTAC CAGTTTGGAT GGCGATATTA TGCCGCAAAT TAAACAGTAT TGGCCACAGG CGCAAAGGTT TCACGTGAAA CAAGGGCATA TACAAAAAAT GACTGAGTAA
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Protein sequence | MLTQLSIHQL RNLHSVNIKV GQCNVFVGAN GSGKTSLLES LYLLSRGKSF RHHQPKRYIS HHAAHATVHA KFANGSSMAI QKAQDASTIL RLDQQTVYVQ SALAKQLPTL LIDPSSMDVL EIGSSSRRQL LDWITFHVKP GFHAQWLAYQ RLLKQRNTIL RQSGYLSDYQ RQELAAWDKG LANHAALITH YRHEAFEEWQ PLFNQLIEQL LPDYAPFIQL RFSAGYNTDL PLDELLQQRL AQDFQTGYTR VGCHRADIQV LWLEDAQARQ TVQQAAETSG MAQTAAHSNI HSHADIKLST DLVDNIEDMN NWEDETAYAL TGNVREQAAN VLSRGEKKLL ITALRLSQLP LLSTKLSTKL SLTESAAVTD TVIGSNSASE DQPYPSALSD AILPVVLLDD ITAELDERAL SILLKTLSEL SCQIFITSLD GDIMPQIKQY WPQAQRFHVK QGHIQKMTE
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