Gene RoseRS_4628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4628 
Symbol 
ID5211614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5799650 
End bp5800753 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID640598207 
Productpeptidase M24 
Protein accessionYP_001278909 
Protein GI148658704 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.160287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00355982 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCACC GCATCACGCG CATCCAGGAA GCCATGCGTC GTTACGGCTT CGACGCTCTG 
GCTATTGTTC CCGGCAGTAA TTTGCGCTAT CTTTCGGGAA TAACGCTGCA CGCCGGTTTG
CGATTGACTC TGGCGCTCAC CCCGGTTTCC GGGCAACCGG CGCTGGTGGT TCCGGCGCTG
GAGCATGCAC GCATTGCCGA GACGACAGGC GCACTGTTTC GCTTCTATCC CTGGAGCGAC
GCCGAAGGAC CGGAACAGGC GCTGGCGCGC GCGACGCGTG ATGTCGGTCT GGGTGCGGGA
AGCGTCATTG GCATCGAGCA TACGGTTATG CGGGTATTTG AACTTCGCGC GCTGGAACAG
GCGCTTCCCG GCGCGCAGAC TGCGGATGTC ACACCACTGC TGATGGACAT GCGCATGGTC
AAAGATGCGG AGGAACTGCA TGCAATCCGC CAGGCAGTGC GTGTCATCGA AGACACGCTG
CGCCAGACGA TCGCGCAGGT ACGGGCAGGC ATGCGCGAAC GCGACATTGC CGACCTGTGG
GAACGCGCTA TTCGCGCTGC GGGATGCTTA CCCGCATTCG AGACCACGGT CGCCAGCGGA
CCGAACAGTG CCAACCCGCA TCATACCAGC GGGGACCGTG TGTTGCAGGA AGGCGATCTG
GTGGTATTCG ACGGCGGCGC CGTGTATCAG GGGTATGTGT CGGATATTAC CCGCACGTTT
GCGGTGGGAC GCCTGTCCGA CGAGGCGCTG CGAATCCACC ATCTTGTGCA GGCGGCGAAT
ACTGCCGGGC GTATCGCTGC CGCGCAACCC GGCGCCACCG GCGAGTCGAT CGACACAGCG
GCGCGGCAGA TCATCGAACA TGGCGGATAC GGAGCGTACT TTATCCACCG CACCGGGCAT
GGGATCGGTC TCGATATCCA CGAACCGCCC TTCATCGTAG CAGGAAACCA GGCGCCGCTT
CCAGTCGGCG CAACATTTAC GGTTGAACCA GGGATTTACA TTCGTGGTCT GGGTGGCGTG
CGCATCGAGG ATGACGTAGT CATCACCGCT GACGGCGCCG AGTCGCTGAC GACCTTTCCG
CGCGATGTGC AGTACCTTTC GTAA
 
Protein sequence
MSHRITRIQE AMRRYGFDAL AIVPGSNLRY LSGITLHAGL RLTLALTPVS GQPALVVPAL 
EHARIAETTG ALFRFYPWSD AEGPEQALAR ATRDVGLGAG SVIGIEHTVM RVFELRALEQ
ALPGAQTADV TPLLMDMRMV KDAEELHAIR QAVRVIEDTL RQTIAQVRAG MRERDIADLW
ERAIRAAGCL PAFETTVASG PNSANPHHTS GDRVLQEGDL VVFDGGAVYQ GYVSDITRTF
AVGRLSDEAL RIHHLVQAAN TAGRIAAAQP GATGESIDTA ARQIIEHGGY GAYFIHRTGH
GIGLDIHEPP FIVAGNQAPL PVGATFTVEP GIYIRGLGGV RIEDDVVITA DGAESLTTFP
RDVQYLS