Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4628 |
Symbol | |
ID | 5211614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5799650 |
End bp | 5800753 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640598207 |
Product | peptidase M24 |
Protein accession | YP_001278909 |
Protein GI | 148658704 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.160287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00355982 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCCACC GCATCACGCG CATCCAGGAA GCCATGCGTC GTTACGGCTT CGACGCTCTG GCTATTGTTC CCGGCAGTAA TTTGCGCTAT CTTTCGGGAA TAACGCTGCA CGCCGGTTTG CGATTGACTC TGGCGCTCAC CCCGGTTTCC GGGCAACCGG CGCTGGTGGT TCCGGCGCTG GAGCATGCAC GCATTGCCGA GACGACAGGC GCACTGTTTC GCTTCTATCC CTGGAGCGAC GCCGAAGGAC CGGAACAGGC GCTGGCGCGC GCGACGCGTG ATGTCGGTCT GGGTGCGGGA AGCGTCATTG GCATCGAGCA TACGGTTATG CGGGTATTTG AACTTCGCGC GCTGGAACAG GCGCTTCCCG GCGCGCAGAC TGCGGATGTC ACACCACTGC TGATGGACAT GCGCATGGTC AAAGATGCGG AGGAACTGCA TGCAATCCGC CAGGCAGTGC GTGTCATCGA AGACACGCTG CGCCAGACGA TCGCGCAGGT ACGGGCAGGC ATGCGCGAAC GCGACATTGC CGACCTGTGG GAACGCGCTA TTCGCGCTGC GGGATGCTTA CCCGCATTCG AGACCACGGT CGCCAGCGGA CCGAACAGTG CCAACCCGCA TCATACCAGC GGGGACCGTG TGTTGCAGGA AGGCGATCTG GTGGTATTCG ACGGCGGCGC CGTGTATCAG GGGTATGTGT CGGATATTAC CCGCACGTTT GCGGTGGGAC GCCTGTCCGA CGAGGCGCTG CGAATCCACC ATCTTGTGCA GGCGGCGAAT ACTGCCGGGC GTATCGCTGC CGCGCAACCC GGCGCCACCG GCGAGTCGAT CGACACAGCG GCGCGGCAGA TCATCGAACA TGGCGGATAC GGAGCGTACT TTATCCACCG CACCGGGCAT GGGATCGGTC TCGATATCCA CGAACCGCCC TTCATCGTAG CAGGAAACCA GGCGCCGCTT CCAGTCGGCG CAACATTTAC GGTTGAACCA GGGATTTACA TTCGTGGTCT GGGTGGCGTG CGCATCGAGG ATGACGTAGT CATCACCGCT GACGGCGCCG AGTCGCTGAC GACCTTTCCG CGCGATGTGC AGTACCTTTC GTAA
|
Protein sequence | MSHRITRIQE AMRRYGFDAL AIVPGSNLRY LSGITLHAGL RLTLALTPVS GQPALVVPAL EHARIAETTG ALFRFYPWSD AEGPEQALAR ATRDVGLGAG SVIGIEHTVM RVFELRALEQ ALPGAQTADV TPLLMDMRMV KDAEELHAIR QAVRVIEDTL RQTIAQVRAG MRERDIADLW ERAIRAAGCL PAFETTVASG PNSANPHHTS GDRVLQEGDL VVFDGGAVYQ GYVSDITRTF AVGRLSDEAL RIHHLVQAAN TAGRIAAAQP GATGESIDTA ARQIIEHGGY GAYFIHRTGH GIGLDIHEPP FIVAGNQAPL PVGATFTVEP GIYIRGLGGV RIEDDVVITA DGAESLTTFP RDVQYLS
|
| |