| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4627 |
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| Symbol | |
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| ID | 5211613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5797594 |
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| End bp | 5799582 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640598206 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001278908 |
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| Protein GI | 148658703 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.622134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00510111 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACAGTC CGCAAACCGC TTTCCTTCCC ATGCTCGTGG AGGAACTGCG AGCATCGCTG
CCGAACATTT CGGAAGTGAT CGATCAACTG GCTGCCAGTC AGTCGAACGA GCAGCGGCGC
GTTCTGCTGC GTCAGTTAGG AGCGCTCTGG TTTCGCCAGG ACGGAGAGCC GGAGGTGCTG
GCAGAATTCG GTCTGGCGCT TTCGGAATTG CATGGCGTCG AGCCGGGGGT TGCACTCTCC
GAGTTGCTGC TGGCATACGG CGCTGCACGC GAAGAACAAC GCACCCGTGA ATGGGAAAGT
CACCTGGTGC GACGTATGGC GGAACTCAAG GGTCTCCACC GGATCATCTC CGCCGCCAAC
TCCACGCTCG ACCTGGATAC GTCGATGCAA CTGGTCGTCG AGACGGTCGC TGAAGTGATC
GGCGTGGAGG TTTGTTCGGT GTACCTGTAC GACAAGAACA CCGATGATCT GACACTGCGG
GCGACCCACG GGTTGAACAG CGCCGCCGTC GGGCAGGTGC GCATCCGTAT CGGCGAGGGT
ATCACCGGAT GGGCTGCGCG GGAGGGGCGA CCGATCGCGG TGCGCGATGT GCGTCGTGAG
CCGCGTTTTC ACATCGAACC GGGGTTGGGC GAGGAACCGT ACCGCTCGAT GCTCGCCGTG
CCGATTGTTC TGTTCAGCGT TGAACGGTTC CATCTGGGCG CTGCCAAGTT GCAGGGTGTG
ATCACCGTTC AAACCTATGG TCCGCGCGAT TTTACCGCCG AAGAGATCAA CTTCGTCGAA
ACCGTCGCCG GCGAACTGGC GTTCTTCATC GTCAATGCGC AACTCTATCA GCAAACCGAC
GAGCAATTGC ACCAGAAGGT GCGCGAACTG ACAACCCTGC AACAGGTCTC AAAGAGTATT
GCTGAGCAAC TCAATCTCGA AGAGGTGTTG AAACTGATCG TCGCCAAGGC AGTGGAACTC
TCGCGCGCTG AACGCGCGGA TATTTTCCGT GTCGGCAATG ATGGACGACT GGAACTCGCC
GCGACCTACG GCGGAACGCC GCGCGGCGAA ATCCCCGGAT TCATCGTTCA GGCAGTGCGC
GAGGCGCGTC CGCTGGCAGT ACACAACGCT TTCAACGACT CGCGCTTCCC CGAACTCGCA
GAAGTCGCAG CACGCGAGAA CTTCTATTCA CTCTTCTGCA TGCCGCTGCG CGTCCAGCAA
AAGCGCACGA TCGGCGCCAT CTGCCTGTAT ACCCGTGAAG CGCGCCATTT CGACTATGAG
CATATGCGCC TTCTTTCTAC CTTTGCCGAC GAAGCGGCGA TTGCGATCGA GAATGCGCGC
CTGTACGACG AAAGCCTGCG CGCTCTGGCG GTCAAATCTG CAATGTTGCA GGAAATGCAT
CATCGTGTGC GCAACAACCT GCAAACGATC TCGGCATTGC TGACCATGCA ACAGCGCCGC
CTGCCGCCAA ATGACCGCAG TGCAATTGCG CTGCGCGACA GTGTGGCGCG TATTCAGGCG
ATTGCGGGCG TTCACAATCT GCTGTGTCAT GAAGATGTCG GCGTGACCAC AGTTGACGCG
GTGGCGCGTC AGATCGTCGA GAGCGCCCGA CTCAGCCTCT CGTCGCCCGA ACGCCCGGTC
CACTTCGAAA TCCGCGGCGT TCAGGCGCGC GTTGGCTCAC GTGACGCTAC TGTGCTGGCA
ATCGTGCTGA ATGAACTGAT CGTCAACGCG ATGACCCACG GGCTTGCCGT TAGCGGCGGC
GTTATCATCA TCGAAACGAG CGAGCAGGAC GGCATGATCG CCGTCGAGGT CCGTGATGAC
GGTCCGAGCC GTGTCGCTTC TCCAGAATCG GCGACTGCGG AATCGTCGGG CGGCGGCAGT
GGATTGGGGT TGCACATCAT CCGCACGCTG GTGCAGGACG ATCTTCAGGG AGAGTTTTCG
CTCACCATCG GTGAGGAATG GACTGTGGCA CGGGTACGCT TCCCACATCA CGAGCGCGAT
ACCCAGTAG
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| Protein sequence | MHSPQTAFLP MLVEELRASL PNISEVIDQL AASQSNEQRR VLLRQLGALW FRQDGEPEVL
AEFGLALSEL HGVEPGVALS ELLLAYGAAR EEQRTREWES HLVRRMAELK GLHRIISAAN
STLDLDTSMQ LVVETVAEVI GVEVCSVYLY DKNTDDLTLR ATHGLNSAAV GQVRIRIGEG
ITGWAAREGR PIAVRDVRRE PRFHIEPGLG EEPYRSMLAV PIVLFSVERF HLGAAKLQGV
ITVQTYGPRD FTAEEINFVE TVAGELAFFI VNAQLYQQTD EQLHQKVREL TTLQQVSKSI
AEQLNLEEVL KLIVAKAVEL SRAERADIFR VGNDGRLELA ATYGGTPRGE IPGFIVQAVR
EARPLAVHNA FNDSRFPELA EVAARENFYS LFCMPLRVQQ KRTIGAICLY TREARHFDYE
HMRLLSTFAD EAAIAIENAR LYDESLRALA VKSAMLQEMH HRVRNNLQTI SALLTMQQRR
LPPNDRSAIA LRDSVARIQA IAGVHNLLCH EDVGVTTVDA VARQIVESAR LSLSSPERPV
HFEIRGVQAR VGSRDATVLA IVLNELIVNA MTHGLAVSGG VIIIETSEQD GMIAVEVRDD
GPSRVASPES ATAESSGGGS GLGLHIIRTL VQDDLQGEFS LTIGEEWTVA RVRFPHHERD
TQ
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